4Z4K
Crystal structure of GFP-TAX1BP1 UBZ1+2 domain fusion protein
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GFP | e4z4kA2 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
A | zf-C2H2_4_like | e4z4kA1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_4_like | ECOD (1.6) |
B | GFP | e4z4kB1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
B | zf-C2H2_4_like | e4z4kB2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_4_like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18112 | Autophagy receptor zinc finger-C2H2 domain (Zn-C2H2_12) | Autophagy receptor zinc finger-C2H2 domain | This domain is found in calcium-binding and coiled-coil domain 2/NDP25 (CALCOCO2/NDP25) found in Homo sapiens. CALCOCO2/NDP25 is an ubiquitin-binding autophagy receptor involved in the selective autophagic degradation of invading pathogens. This doma ... | Domain | |
PF01353 | Green fluorescent protein (GFP) | Green fluorescent protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000786 | Green fluorescent protein, GFP | Family | |
IPR011584 | Green fluorescent protein-related | Family | |
IPR009017 | Green fluorescent protein | Homologous Superfamily | |
IPR041611 | SKICH domain | Domain | |
IPR051002 | Ubiquitin-binding and autophagy-associated domain-containing protein | Family | |
IPR012852 | Calcium binding and coiled-coil domain-like | Domain | |
IPR041641 | CALCOCO1/2, zinc finger UBZ1-type | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q86VP1 | :