5EB0
crystal form II of YfiB belonging to P41
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5eb0a_ | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | OmpA-like | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
B | d5eb0b_ | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | OmpA-like | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | OmpA | e5eb0A1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
B | OmpA | e5eb0B1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1330.60 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
B | 3.30.1330.60 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00691 | OmpA family (OmpA) | OmpA family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
YfiB | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006664 | Outer membrane protein, bacterial | Domain | |
IPR006665 | OmpA-like domain | Domain | |
IPR050330 | Bacterial Outer Membrane Structural/Functional | Family | |
IPR036737 | OmpA-like domain superfamily | Homologous Superfamily |