6C1U
MBD2 in complex with a deoxy-oligonucleotide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DNA-binding domain | 8081855 | 3000183 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | DNA-binding domain | 8081855 | 3000183 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | DNA-binding domain | 8081855 | 3000183 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | DNA-binding domain | 8081855 | 3000183 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MBD | e6c1uA1 | A: a+b two layers | X: DNA-binding domain | H: Methyl-CpG-binding domain, MBD (From Topology) | T: Methyl-CpG-binding domain, MBD | F: MBD | ECOD (1.6) |
B | MBD | e6c1uB1 | A: a+b two layers | X: DNA-binding domain | H: Methyl-CpG-binding domain, MBD (From Topology) | T: Methyl-CpG-binding domain, MBD | F: MBD | ECOD (1.6) |
E | MBD | e6c1uE1 | A: a+b two layers | X: DNA-binding domain | H: Methyl-CpG-binding domain, MBD (From Topology) | T: Methyl-CpG-binding domain, MBD | F: MBD | ECOD (1.6) |
F | MBD | e6c1uF1 | A: a+b two layers | X: DNA-binding domain | H: Methyl-CpG-binding domain, MBD (From Topology) | T: Methyl-CpG-binding domain, MBD | F: MBD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.890.10 | Alpha Beta | 2-Layer Sandwich | Methyl-cpg-binding Protein 2 | Chain A | CATH (4.3.0) |
B | 3.30.890.10 | Alpha Beta | 2-Layer Sandwich | Methyl-cpg-binding Protein 2 | Chain A | CATH (4.3.0) |
E | 3.30.890.10 | Alpha Beta | 2-Layer Sandwich | Methyl-cpg-binding Protein 2 | Chain A | CATH (4.3.0) |
F | 3.30.890.10 | Alpha Beta | 2-Layer Sandwich | Methyl-cpg-binding Protein 2 | Chain A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR025884 | Methyl-CpG binding protein 2/3, C-terminal domain | Domain | |
IPR016177 | DNA-binding domain superfamily | Homologous Superfamily | |
IPR001739 | Methyl-CpG DNA binding | Domain | |
IPR032343 | Methyl-CpG-binding domain protein 2/3, p55-binding region | Domain |