Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCore histone-like 8070539 3001387 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCore histone-like 8070539 3001387 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCore histone-like 8039342 3001387 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCore histone-like 8039342 3001387 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyCore histone-like 8039342 3001387 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyCore histone-like 8039342 3001387 SCOP2B (2022-06-29)
USCOP2B SuperfamilyCore histone-like 8039342 3001387 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyCore histone-like 8039342 3001387 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyCore histone-like 8039340 3001387 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyCore histone-like 8039340 3001387 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyCore histone-like 8039340 3001387 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyCore histone-like 8039340 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHistonee6l49A1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
EHistonee6l49E1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
BHistone_1e6l49B1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
FHistone_1e6l49F1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
LHistone_1e6l49L1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
PHistone_1e6l49P1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
THistone_1e6l49T1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
XHistone_1e6l49X1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
CHistone_1e6l49C1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
GHistone_1e6l49G1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
MHistone_1e6l49M1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
QHistone_1e6l49Q1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
UHistone_1e6l49U1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
YHistone_1e6l49Y1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
DHistonee6l49D1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
HHistonee6l49H1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
NHistonee6l49N1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
RHistonee6l49R1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
VHistonee6l49V1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
ZHistonee6l49Z1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
KHistonee6l49K1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
OHistonee6l49O1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
SHistonee6l49S1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
WHistonee6l49W1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, F, L, P, T
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
C, G, M, Q, U
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E
Histone H3-like centromeric protein A
B, F, L, P, T
Histone H4
C, G, M, Q, U
Histone H2A type 1-B/E
D, H, N, R, V
Histone H2B type 1-J
DNA (485-MER)---
DNA (485-MER)---
K, O, S, W
Histone H3.1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, E
IPR009072Histone-foldHomologous Superfamily
A, E
IPR007125Histone H2A/H2B/H3Domain
A, E
IPR000164Histone H3/CENP-AFamily
B, F, L, P, T
IPR009072Histone-foldHomologous Superfamily
B, F, L, P, T
IPR035425CENP-T/Histone H4, histone foldDomain
B, F, L, P, T
IPR001951Histone H4Family
B, F, L, P, T
IPR019809Histone H4, conserved siteConserved Site
B, F, L, P, T
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
C, G, M, Q, U
IPR009072Histone-foldHomologous Superfamily
C, G, M, Q, U
IPR007125Histone H2A/H2B/H3Domain
C, G, M, Q, U
IPR002119Histone H2AFamily
C, G, M, Q, U
IPR032454Histone H2A, C-terminal domainDomain
C, G, M, Q, U
IPR032458Histone H2A conserved siteConserved Site
D, H, N, R, V
IPR009072Histone-foldHomologous Superfamily
D, H, N, R, V
IPR007125Histone H2A/H2B/H3Domain
D, H, N, R, V
IPR000558Histone H2BFamily
K, O, S, W
IPR009072Histone-foldHomologous Superfamily
K, O, S, W
IPR007125Histone H2A/H2B/H3Domain
K, O, S, W
IPR000164Histone H3/CENP-AFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, E
PharosP49450
B, F, L, P, T
PharosP62805
C, G, M, Q, U
PharosP04908
D, H, N, R, V
PharosP06899
K, O, S, W
PharosP68431