Annotations: 7DBO

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ADC-like	8042536	3001132	SCOP2B (2021-05-27)
B	SCOP2B Superfamily	ADC-like	8042536	3001132	SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02359	e7dboA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: double psi	F: PF02359	ECOD (1.6)
B	PF02359	e7dboB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: double psi	F: PF02359	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02359	Cell division protein 48 (CDC48), N-terminal domain (CDC48_N)	Cell division protein 48 (CDC48), N-terminal domain	This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...	This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	VCP-like ATPase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding polyubiquitin modification-dependent protein binding protein binding modification-dependent protein binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	protein localization cellular response to stimulus protein exit from endoplasmic reticulum cellular localization establishment of protein localization nitrogen compound transport catabolic process response to stimulus transport proteolysis involved in protein catabolic process macromolecule catabolic process localization ERAD pathway cellular response to stress response to stress protein localization cellular response to stimulus protein exit from endoplasmic reticulum cellular localization establishment of protein localization nitrogen compound transport catabolic process response to stimulus transport proteolysis involved in protein catabolic process macromolecule catabolic process localization ERAD pathway cellular response to stress response to stress proteolysis establishment of localization in cell cellular macromolecule localization protein metabolic process response to endoplasmic reticulum stress organonitrogen compound catabolic process organonitrogen compound metabolic process endoplasmic reticulum to cytosol transport response to organonitrogen compound intracellular transport response to nitrogen compound proteasomal protein catabolic process primary metabolic process protein catabolic process establishment of localization protein transport response to chemical retrograde protein transport, ER to cytosol macromolecule localization cellular process metabolic process macromolecule metabolic process intracellular protein transport	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR029067	CDC48 domain 2-like superfamily	Homologous Superfamily
A, B	IPR041569	AAA ATPase, AAA+ lid domain	Domain
A, B	IPR004201	CDC48, domain 2	Domain
A, B	IPR009010	Aspartate decarboxylase-like domain superfamily	Homologous Superfamily
A, B	IPR005938	AAA ATPase, CDC48 family	Family
A, B	IPR003960	ATPase, AAA-type, conserved site	Conserved Site
A, B	IPR003338	CDC48, N-terminal subdomain	Domain
A, B	IPR003593	AAA+ ATPase domain	Domain
A, B	IPR003959	ATPase, AAA-type, core	Domain
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.