7OBR

RNC-SRP early complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth B]SCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
G [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
Q [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
T [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095982 3001045 SCOP2B (2022-06-29)
X [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8061156 3002158 SCOP2B (2022-06-29)
Y [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
AA [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
BA [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
CA [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
DA [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
FA [auth c]SCOP2B SuperfamilyL30e-like 8094953 3001739 SCOP2B (2022-06-29)
HA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
IA [auth f]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
JA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
LA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
OA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8095595 3001756 SCOP2B (2022-06-29)
SA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
WA [auth t]SCOP2B SuperfamilySignal recognition particle alu RNA binding heterodimer, SRP9/14 8077811 3000976 SCOP2B (2022-06-29)
XA [auth u]SCOP2B SuperfamilyTPR-like 8053750 3001345 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth A]Ribosomal_L2_1e7obrA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
E [auth A]Ribosomal_L2_C_2e7obrA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
F [auth B]Ribosomal_L3e7obrB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
G [auth C]Ribosomal_L4e7obrC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
G [auth C]Ribos_L4_asso_Ce7obrC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
H [auth D]Ribosomal_L5ee7obrD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
I [auth E]Ribosomal_L6ee7obrE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
J [auth F]Ribosomal_L30_1e7obrF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
K [auth G]Ribosomal_L7Ae_1e7obrG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
L [auth H]Ribosomal_L6_2e7obrH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
L [auth H]Ribosomal_L6e7obrH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
M [auth I]Ribosomal_L16e7obrI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth J]Ribosomal_L5_Ce7obrJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
O [auth L]Ribosomal_L13ee7obrL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
P [auth M]Ribosomal_L14ee7obrM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
Q [auth N]Ribosomal_L15ee7obrN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
R [auth O]Ribosomal_L13e7obrO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
S [auth P]Ribosomal_L22e7obrP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
T [auth Q]Ribosomal_L18e7obrQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
U [auth R]Ribosomal_L19e_Ne7obrR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
U [auth R]Ribosomal_L19e_Ce7obrR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
V [auth S]Ribosomal_L18Ae7obrS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
W [auth T]Ribosomal_L21ee7obrT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
X [auth U]Ribosomal_L22ee7obrU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
Y [auth V]Ribosomal_L14e7obrV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Z [auth W]Ribosomal_L24ee7obrW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
AA [auth X]Ribosomal_L23_3e7obrX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
BA [auth Y]Ribosomal_L26e7obrY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
CA [auth Z]Ribosomal_L27ee7obrZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
DA [auth a]Ribosomal_L18e7obra1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
EA [auth b]Ribosomal_L29ee7obrb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
FA [auth c]Ribosomal_L7Aee7obrc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
GA [auth d]Ribosomal_L31ee7obrd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
HA [auth e]Ribosomal_L32ee7obre1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
IA [auth f]Ribosomal_L35Aee7obrf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
JA [auth g]Ribosomal_L34ee7obrg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
KA [auth h]Ribosomal_L29_2e7obrh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
LA [auth i]Ribosomal_L36ee7obri1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
MA [auth j]Ribosomal_L37ee7obrj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
NA [auth k]Ribosomal_L38ee7obrk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
OA [auth l]Ribosomal_L39e7obrl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
PA [auth m]Ribosomal_L40ee7obrm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
QA [auth n]Ribosomal_L41e7obrn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
RA [auth o]Ribosomal_L44e7obro1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
SA [auth p]Ribosomal_L37aee7obrp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
TA [auth q]SRP19e7obrq1 A: alpha arraysX: HTHH: HTHT: Putative DNA-binding domainF: SRP19ECOD (1.6)
UA [auth r]Ribosomal_L28ee7obrr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
WA [auth t]SRP14e7obrt1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: SRP14ECOD (1.6)
XA [auth u]SRP68e7obru1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: SRP68ECOD (1.6)
YA [auth w]SRP9-21e7obrw1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: SRP9-21ECOD (1.6)
ZA [auth x]SRP_SPBe7obrx2 A: alpha arraysX: HTHH: HTHT: tri-helicalF: SRP_SPBECOD (1.6)
ZA [auth x]SRP54_Ne7obrx3 A: alpha bundlesX: Domain of the SRP/SRP receptor G proteins-likeH: Domain of the SRP/SRP receptor G-proteins (From Topology)T: Domain of the SRP/SRP receptor G-proteinsF: SRP54_NECOD (1.6)
ZA [auth x]SRP54e7obrx1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SRP54ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
E [auth A]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
F [auth B]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
F [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
G [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
G [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth C]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
H [auth D]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
I [auth E]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
I [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
I [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
J [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
J [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
K [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
L [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
L [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
M [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth I]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
N [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
N [auth J]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
N [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
O [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
P [auth M]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
P [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
Q [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
R [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
S [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
T [auth Q]PF01922SRP19 protein (SRP19)SRP19 protein- Family
T [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
U [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
U [auth R]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
V [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
W [auth T]PF02290Signal recognition particle 14kD protein (SRP14)Signal recognition particle 14kD proteinThe signal recognition particle (SRP) is a multimeric protein involved in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP14 and SRP9 form a complex essential for SRP RNA binding.Domain
X [auth U]PF16969RNA-binding signal recognition particle 68 (SRP68)RNA-binding signal recognition particle 68- Family
X [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
Y [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Z [auth W]PF05486Signal recognition particle 9 kDa protein (SRP9) (SRP9-21)Signal recognition particle 9 kDa protein (SRP9)This family consists of several eukaryotic SRP9 proteins. SRP9 together with the Alu-homologous region of 7SL RNA and SRP14 comprise the "Alu domain" of SRP, which mediates pausing of synthesis of ribosome associated nascent polypeptides that have be ...This family consists of several eukaryotic SRP9 proteins. SRP9 together with the Alu-homologous region of 7SL RNA and SRP14 comprise the "Alu domain" of SRP, which mediates pausing of synthesis of ribosome associated nascent polypeptides that have been engaged by the targeting domain of SRP [1]. This family also contains the homologous fungal SRP21 [2].
Domain
Z [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
AA [auth X]PF00448SRP54-type protein, GTPase domain (SRP54)SRP54-type protein, GTPase domainThis family includes relatives of the G-domain of the SRP54 family of proteins.Domain
AA [auth X]PF02881SRP54-type protein, helical bundle domain (SRP54_N)SRP54-type protein, helical bundle domain- Domain
AA [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
BA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
BA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
CA [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
CA [auth Z]PF00467KOW motif (KOW)KOW motif- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]SRP RNA---
B [auth 5]28S rRNA---
C [auth 7]5S ribosomal RNA---
D [auth 8]5.8S ribosomal RNA---
E [auth A]60S ribosomal protein L8
F [auth B]uL3
G [auth C]60S ribosomal protein L4
H [auth D]60S ribosomal protein L5
I [auth E]60S ribosomal protein L6
J [auth F]uL30
K [auth G]60S ribosomal protein L7a
L [auth H]60S ribosomal protein L9
M [auth I]60S ribosomal protein L10
N [auth J]Ribosomal protein L11
O [auth L]60S ribosomal protein L13- - -
P [auth M]60S ribosomal protein L14
Q [auth N]Ribosomal protein L15
R [auth O]60S ribosomal protein L13a
S [auth P]uL22
T [auth Q]eL18
U [auth R]60S RIBOSOMAL PROTEIN EL19
V [auth S]60S ribosomal protein L18a
W [auth T]eL21
X [auth U]Ribosomal protein L22
Y [auth V]Ribosomal protein L23
Z [auth W]Ribosomal protein L24
AA [auth X]uL23
BA [auth Y]Ribosomal protein L26
CA [auth Z]60S ribosomal protein L27
DA [auth a]uL15
EA [auth b]60S ribosomal protein L29
FA [auth c]60S ribosomal protein L30
GA [auth d]eL31
HA [auth e]eL32
IA [auth f]eL33
JA [auth g]60S ribosomal protein L34
KA [auth h]uL29
LA [auth i]60S ribosomal protein L36
MA [auth j]Ribosomal protein L37
NA [auth k]eL38---
OA [auth l]eL39
PA [auth m]60S RIBOSOMAL PROTEIN EL40
QA [auth n]60s ribosomal protein l41
RA [auth o]eL42
SA [auth p]eL43
TA [auth q]Signal recognition particle 19
UA [auth r]eL28
VA [auth s]Dipeptidyl aminopeptidase B
WA [auth t]Signal recognition particle 14 kDa protein
XA [auth u]Signal recognition particle subunit SRP68
YA [auth w]Signal recognition particle 9 kDa protein
ZA [auth x]Signal recognition particle 54 kDa protein
AB [auth z]Signal recognition particle subunit SRP72

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth A]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E [auth A]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth A]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth A]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth A]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth A]IPR002171Large ribosomal subunit protein uL2Family
F [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
F [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth B]IPR000597Large ribosomal subunit protein uL3Family
G [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
G [auth C]IPR002136Large ribosomal subunit protein uL4Family
G [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
G [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
G [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth D]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
H [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
I [auth E]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
I [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
I [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
I [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth E]IPR000915Large ribosomal subunit protein eL6Family
J [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
J [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
J [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
J [auth F]IPR039699Large ribosomal subunit protein uL30Family
J [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
J [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
J [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
K [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
K [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
K [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
K [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
K [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
L [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
L [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
L [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
L [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
M [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth I]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
M [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth I]IPR047873Large ribosomal subunit protein uL16Family
M [auth I]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
N [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
N [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
N [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
N [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
N [auth J]IPR002132Large ribosomal subunit protein uL5Family
P [auth M]IPR039660Large ribosomal subunit protein eL14Family
P [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
P [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
Q [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Q [auth N]IPR000439Large ribosomal subunit protein eL15Family
R [auth O]IPR004213Flt3 ligandFamily
R [auth O]IPR009079Four-helical cytokine-like, coreHomologous Superfamily
S [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth P]IPR001063Large ribosomal subunit protein uL22Family
S [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
T [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
T [auth Q]IPR000039Large ribosomal subunit protein eL18Family
T [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
U [auth R]IPR039547Large ribosomal subunit protein eL19Family
U [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
U [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
U [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
V [auth S]IPR028877Large ribosomal subunit protein eL20Family
V [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
V [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
W [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
W [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth T]IPR001147Large ribosomal subunit protein eL21Family
W [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth U]IPR002671Large ribosomal subunit protein eL22Family
X [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
Y [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Y [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Y [auth V]IPR000218Large ribosomal subunit protein uL14Family
Z [auth W]IPR011017TRASH domainDomain
Z [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Z [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Z [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
AA [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth X]IPR019985Large ribosomal subunit protein uL23Family
AA [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
AA [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
BA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
BA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
BA [auth Y]IPR005824KOWDomain
BA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
CA [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
CA [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth Z]IPR001141Large ribosomal subunit protein eL27Family
CA [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
CA [auth Z]IPR005824KOWDomain
CA [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
DA [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
DA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DA [auth a]IPR030878Large ribosomal subunit protein uL15Family
DA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
EA [auth b]IPR002673Large ribosomal subunit protein eL29Family
FA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
FA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
FA [auth c]IPR000231Large ribosomal subunit protein eL30Family
FA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
FA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
GA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth d]IPR000054Large ribosomal subunit protein eL31Family
HA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
HA [auth e]IPR001515Large ribosomal subunit protein eL32Family
HA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IA [auth f]IPR001780Large ribosomal subunit protein eL33Family
IA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
JA [auth g]IPR008195Large ribosomal subunit protein eL34Family
JA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
KA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
KA [auth h]IPR001854Large ribosomal subunit protein uL29Family
KA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
KA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
LA [auth i]IPR000509Large ribosomal subunit protein eL36Family
LA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
MA [auth j]IPR001569Large ribosomal subunit protein eL37Family
MA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
MA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
OA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth l]IPR000077Large ribosomal subunit protein eL39Family
OA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
PA [auth m]IPR019954Ubiquitin conserved siteConserved Site
PA [auth m]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
PA [auth m]IPR000626Ubiquitin-like domainDomain
PA [auth m]IPR019956Ubiquitin domainDomain
PA [auth m]IPR050158Ubiquitin and ubiquitin-likeFamily
PA [auth m]IPR001975Large ribosomal subunit protein eL40 domainDomain
PA [auth m]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
QA [auth n]IPR007836Large ribosomal subunit protein eS32Family
RA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
RA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth o]IPR000552Large ribosomal subunit protein eL42Family
SA [auth p]IPR002674Large ribosomal subunit protein eL43Family
SA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
TA [auth q]IPR002778Signal recognition particle, SRP19 subunitFamily
TA [auth q]IPR036521Signal recognition particle, subunit SRP19-like superfamilyHomologous Superfamily
UA [auth r]IPR029004Ribosomal eL28/Mak16Domain
UA [auth r]IPR002672Large ribosomal subunit protein eL28Family
VA [auth s]IPR001375Peptidase S9, prolyl oligopeptidase, catalytic domainDomain
VA [auth s]IPR002471Peptidase S9, serine active siteActive Site
VA [auth s]IPR002469Dipeptidylpeptidase IV, N-terminal domainDomain
VA [auth s]IPR050278Serine protease S9B/DPPIVFamily
VA [auth s]IPR029058Alpha/Beta hydrolase foldHomologous Superfamily
WA [auth t]IPR003210Signal recognition particle, SRP14 subunitFamily
WA [auth t]IPR009018Signal recognition particle, SRP9/SRP14 subunitHomologous Superfamily
XA [auth u]IPR026258Signal recognition particle subunit SRP68Family
XA [auth u]IPR038253SRP68, N-terminal domain superfamilyHomologous Superfamily
XA [auth u]IPR034652Signal recognition particle subunit SRP68, RNA-binding domainDomain
YA [auth w]IPR008832Signal recognition particle SRP9Family
YA [auth w]IPR009018Signal recognition particle, SRP9/SRP14 subunitHomologous Superfamily
YA [auth w]IPR039432SRP9 domainDomain
YA [auth w]IPR039914Signal recognition particle SRP9-likeFamily
ZA [auth x]IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
ZA [auth x]IPR004125Signal recognition particle, SRP54 subunit, M-domainDomain
ZA [auth x]IPR003593AAA+ ATPase domainDomain
ZA [auth x]IPR013822Signal recognition particle SRP54, helical bundleDomain
ZA [auth x]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
ZA [auth x]IPR022941Signal recognition particle, SRP54 subunitFamily
ZA [auth x]IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
ZA [auth x]IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
ZA [auth x]IPR006325Signal recognition particle, SRP54 subunit, eukaryoticFamily
ZA [auth x]IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyHomologous Superfamily
AB [auth z]IPR013699Signal recognition particle, SRP72 subunit, RNA-bindingDomain
AB [auth z]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
AB [auth z]IPR026270Signal recognition particle, SRP72 subunitFamily
AB [auth z]IPR031545Signal recognition particle subunit SRP72, TPR-like repeatRepeat
AB [auth z]IPR019734Tetratricopeptide repeatRepeat