Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANosD,Glyco_hydro_120e7qbaA1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: NosD,Glyco_hydro_120ECOD (1.6)
DF_UNCLASSIFIEDe7qbaD1 A: alpha bundlesX: Type II ABC exporter transmembrane domain foldH: Type II ABC exporter transmembrane domain-relatedT: ABCG5/ABCG8 transmembrane domainF: F_UNCLASSIFIEDECOD (1.6)
EF_UNCLASSIFIEDe7qbaE1 A: alpha bundlesX: Type II ABC exporter transmembrane domain foldH: Type II ABC exporter transmembrane domain-relatedT: ABCG5/ABCG8 transmembrane domainF: F_UNCLASSIFIEDECOD (1.6)
F [auth H]COX2e7qbaH1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: COX2ECOD (1.6)
F [auth H]PRK02888e7qbaH2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PRK02888ECOD (1.6)
G [auth I]COX2e7qbaI2 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: COX2ECOD (1.6)
G [auth I]PRK02888e7qbaI1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PRK02888ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05048Periplasmic copper-binding protein (NosD) (NosD)Periplasmic copper-binding protein (NosD)- Repeat
B, C
PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.
Domain
D, E
PF12679ABC-2 family transporter protein (ABC2_membrane_2)ABC-2 family transporter proteinThis family is related to the ABC-2 membrane transporter family [1].Domain
F [auth H],
G [auth I]
PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domain- Domain
F [auth H],
G [auth I]
PF18793Nitrous oxide reductase propeller repeat 2 (nos_propeller_2)Nitrous oxide reductase propeller repeat 2- Repeat
F [auth H],
G [auth I]
PF18764Nitrous oxide reductase propeller repeat (nos_propeller)Nitrous oxide reductase propeller repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Probable ABC transporter binding protein NosD- -
B, C
Probable ABC transporter ATP-binding protein NosF -
D, E
Probable ABC transporter permease protein NosY -
F [auth H],
G [auth I]
Nitrous-oxide reductase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR026464Nitrous oxide reductase family maturation protein NosDFamily
IPR007742Periplasmic copper-binding protein NosD, beta helix domainDomain
IPR006626Parallel beta-helix repeatRepeat
IPR012334Pectin lyase foldHomologous Superfamily
IPR006633Carbohydrate-binding/sugar hydrolysis domainDomain
IPR022441Parallel beta-helix repeat-2Repeat
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily
B, C
IPR051782ABC Transporter Superfamily, Various FunctionsFamily
B, C
IPR003593AAA+ ATPase domainDomain
B, C
IPR017871ABC transporter-like, conserved siteConserved Site
B, C
IPR003439ABC transporter-like, ATP-binding domainDomain
B, C
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D, E
IPR032688ABC-2 type transporter permease protein NosY/YtrC-likeFamily
F [auth H],
G [auth I]
IPR011045Nitrous oxide reductase, N-terminalHomologous Superfamily
F [auth H],
G [auth I]
IPR023644Nitrous-oxide reductaseFamily
F [auth H],
G [auth I]
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
F [auth H],
G [auth I]
IPR041142Nitrous oxide reductase, propeller repeat 2Repeat
F [auth H],
G [auth I]
IPR034205Nitrous-oxide reductase, C-terminalDomain
F [auth H],
G [auth I]
IPR041114Nitrous oxide reductase, propeller repeat 1Repeat
F [auth H],
G [auth I]
IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
F [auth H],
G [auth I]
IPR008972CupredoxinHomologous Superfamily
F [auth H],
G [auth I]
IPR001505Copper centre Cu(A)Binding Site
F [auth H],
G [auth I]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
F [auth H],
G [auth I]
IPR019546Twin-arginine translocation pathway, signal sequence, bacterial/archaealConserved Site
F [auth H],
G [auth I]
IPR051403NosZ/Cytochrome c oxidase subunit 2Family

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM