8DBU

E. coli ATP synthase imaged in 10mM MgATP State2 "down" Fo classified


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like8056898 3000684 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like8056895 3001034 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyRecA-like P-loop NTPases8056897 3002019 SCOP2B (2021-05-27)
ASCOP2B SuperfamilyRecA-like P-loop NTPases8056897 3002019 SCOP2B (2021-05-27)
ASCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like8056898 3000684 SCOP2B (2021-05-27)
ASCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like8056895 3001034 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like8056895 3001034 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyRecA-like P-loop NTPases8056897 3002019 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like8056898 3000684 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyRecA-like P-loop NTPases8056933 3002019 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like8056934 3000684 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like8056931 3001034 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like8056931 3001034 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyRecA-like P-loop NTPases8056933 3002019 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like8056934 3000684 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyRecA-like P-loop NTPases8056933 3002019 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyATP synthase alpha/beta C-terminal domain-like8056934 3000684 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyATP synthase alpha/beta N-terminal domain-like8056931 3001034 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyATP synthase gamma subunit-like8033225 3000451 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyEpsilon subunit of F1F0-ATP synthase N-terminal domain8043174 3000182 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyEpsilon subunit of F1F0-ATP synthase C-terminal domain8036325 3000785 SCOP2B (2021-05-27)
JSCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
K [auth L]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
M [auth N]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
N [auth O]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
P [auth Q]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
R [auth S]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
ISCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
L [auth M]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
O [auth P]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
Q [auth R]SCOP2B SuperfamilyF1F0 ATP synthase subunit C8037817 3000499 SCOP2B (2021-05-27)
S [auth W]SCOP2B SuperfamilyN-terminal domain of the delta subunit of the F1F0-ATP synthase8037862 3000714 SCOP2B (2021-05-27)
T [auth X]SCOP2B SuperfamilyF1F0 ATP synthase subunit B membrane domain8040993 3000877 SCOP2B (2021-05-27)
U [auth Y]SCOP2B SuperfamilyF1F0 ATP synthase subunit B membrane domain8040993 3000877 SCOP2B (2021-05-27)
V [auth a]SCOP2B SuperfamilyF1F0 ATP synthase subunit A8037822 3000506 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPF02874e8dbuC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
CPF00306e8dbuC3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF00306ECOD (1.6)
CPF00006e8dbuC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
APF02874e8dbuA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
APF00306e8dbuA3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF00306ECOD (1.6)
APF00006e8dbuA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
BPF02874e8dbuB3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
BPF00306e8dbuB1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF00306ECOD (1.6)
BPF00006e8dbuB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
DPF02874e8dbuD2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
DPF22919e8dbuD1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
DPF00006e8dbuD3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
EPF02874e8dbuE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
EPF22919e8dbuE2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
EPF00006e8dbuE3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
FPF02874e8dbuF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
FPF22919e8dbuF3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
FPF00006e8dbuF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
GPF00231e8dbuG1 A: a/b three-layered sandwichesX: ATP synthase (F1-ATPase), gamma subunit (From Topology)H: ATP synthase (F1-ATPase), gamma subunit (From Topology)T: ATP synthase (F1-ATPase), gamma subunitF: PF00231ECOD (1.6)
HPF02823e8dbuH1 A: beta sandwichesX: Epsilon subunit of F1F0-ATP synthase-NH: Epsilon subunit of F1F0-ATP synthase-N (From Topology)T: Epsilon subunit of F1F0-ATP synthase-NF: PF02823ECOD (1.6)
HPF00401e8dbuH2 A: alpha bundlesX: Long alpha-hairpinH: Epsilon subunit of F1F0-ATP synthase C-terminal domain (From Topology)T: Epsilon subunit of F1F0-ATP synthase C-terminal domainF: PF00401ECOD (1.6)
JPF00137e8dbuJ1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
K [auth L]PF00137e8dbuL1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
M [auth N]PF00137e8dbuN1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
N [auth O]PF00137e8dbuO1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
P [auth Q]PF00137e8dbuQ1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
R [auth S]PF00137e8dbuS1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
IPF00137e8dbuI1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
L [auth M]PF00137e8dbuM1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
O [auth P]PF00137e8dbuP1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
Q [auth R]PF00137e8dbuR1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
S [auth W]PF00213e8dbuW1 A: alpha bundlesX: ATPD N-terminal domain-likeH: N-terminal domain of the delta subunit of the F1F0-ATP synthase (From Topology)T: N-terminal domain of the delta subunit of the F1F0-ATP synthaseF: PF00213ECOD (1.6)
T [auth X]PF00430e8dbuX1 A: extended segmentsX: F-type ATP synthase subunit b (From Topology)H: F-type ATP synthase subunit b (From Topology)T: F-type ATP synthase subunit bF: PF00430ECOD (1.6)
U [auth Y]PF00430e8dbuY1 A: extended segmentsX: F-type ATP synthase subunit b (From Topology)H: F-type ATP synthase subunit b (From Topology)T: F-type ATP synthase subunit bF: PF00430ECOD (1.6)
V [auth a]PF00119e8dbua1 A: alpha bundlesX: F1F0 ATP synthase subunit A (From Topology)H: F1F0 ATP synthase subunit A (From Topology)T: F1F0 ATP synthase subunit AF: PF00119ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
A, B, C
PF00306ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C)ATP synthase alpha/beta chain, C terminal domain- Domain
A, B, C
PF00119ATP synthase A chain (ATP-synt_A)ATP synthase A chain- Domain
A, B, C
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
D, E, F
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
D, E, F
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
D, E, F
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
PF00231ATP synthase (ATP-synt)ATP synthase- Domain
PF02823ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N)ATP synthase, Delta/Epsilon chain, beta-sandwich domainPart of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ...Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213).
Domain
PF00401ATP synthase, Delta/Epsilon chain, long alpha-helix domain (ATP-synt_DE)ATP synthase, Delta/Epsilon chain, long alpha-helix domainPart of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sens ...Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213). This entry includes the epsilon subunit from bacteria and plants.
Domain
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
S [auth W]PF00213ATP synthase delta (OSCP) subunit (OSCP)ATP synthase delta (OSCP) subunit- Family
T [auth X],
U [auth Y]
PF00430ATP synthase B/B' CF(0) (ATP-synt_B)ATP synthase B/B' CF(0)- Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
ATP synthase subunit alpha
D, E, F
ATP synthase subunit beta
ATP synthase gamma chain
ATP synthase epsilon chain
ATP synthase subunit c
S [auth W]ATP synthase subunit delta
T [auth X],
U [auth Y]
ATP synthase subunit b
V [auth a]ATP synthase subunit a

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR038376ATP synthase, alpha subunit, C-terminal domain superfamilyHomologous Superfamily
A, B, C
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
A, B, C
IPR033732ATP synthase, F1 complex, alpha subunit nucleotide-binding domainDomain
A, B, C
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
A, B, C
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
A, B, C
IPR000793ATP synthase, alpha subunit, C-terminalDomain
A, B, C
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
A, B, C
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
A, B, C
IPR005294ATP synthase, F1 complex, alpha subunitFamily
A, B, C
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D, E, F
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
D, E, F
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
D, E, F
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
D, E, F
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
D, E, F
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
D, E, F
IPR003593AAA+ ATPase domainDomain
D, E, F
IPR005722ATP synthase, F1 complex, beta subunitFamily
D, E, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR023632ATP synthase, F1 complex, gamma subunit conserved siteConserved Site
IPR000131ATP synthase, F1 complex, gamma subunitFamily
IPR035968ATP synthase, F1 complex, gamma subunit superfamilyHomologous Superfamily
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalHomologous Superfamily
IPR036794ATP synthase delta/epsilon subunit, C-terminal domain superfamilyHomologous Superfamily
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalDomain
IPR020547ATP synthase epsilon subunit, C-terminal domainDomain
IPR001469ATP synthase, F1 complex, delta/epsilon subunitFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR005953ATP synthase, F0 complex, subunit C, bacterial/chloroplastFamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
S [auth W]IPR020781ATPase, OSCP/delta subunit, conserved siteConserved Site
S [auth W]IPR000711ATPase, OSCP/delta subunitFamily
S [auth W]IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilyHomologous Superfamily
T [auth X],
U [auth Y]
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastFamily
T [auth X],
U [auth Y]
IPR005864ATP synthase, F0 complex, subunit b, bacterialFamily
T [auth X],
U [auth Y]
IPR028987F-type ATP synthase subunit B-like, membrane domain superfamilyHomologous Superfamily
V [auth a]IPR023011ATP synthase, F0 complex, subunit A, active siteActive Site
V [auth a]IPR000568ATP synthase, F0 complex, subunit AFamily
V [auth a]IPR035908ATP synthase, F0 complex, subunit A superfamilyHomologous Superfamily
V [auth a]IPR045082ATP synthase, F0 complex, subunit A, bacterial/chloroplastFamily