8F0A
Client-bound structure of a DegP trimer within a 12mer cage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PDZ domain-like | 8040752 | 3000388 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Trypsin-like serine proteases | 8040753 | 3000114 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Trypsin-like serine proteases | 8040753 | 3000114 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PDZ domain-like | 8040752 | 3000388 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PDZ domain-like | 8040752 | 3000388 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Trypsin-like serine proteases | 8040753 | 3000114 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | PF00595 | e8f0aD1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PF00595 | ECOD (1.6) |
E | PF00595 | e8f0aE1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PF00595 | ECOD (1.6) |
F | PF00595 | e8f0aF1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PF00595 | ECOD (1.6) |
G [auth a] | F_UNCLASSIFIED | e8f0aa1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth b] | F_UNCLASSIFIED | e8f0ab1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: F_UNCLASSIFIED | ECOD (1.6) |
I [auth c] | F_UNCLASSIFIED | e8f0ac1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF13365 | e8f0aA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: PF13365 | ECOD (1.6) |
A | PF00595 | e8f0aA1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PF00595 | ECOD (1.6) |
B | PF13365 | e8f0aB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: PF13365 | ECOD (1.6) |
B | PF00595 | e8f0aB1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PF00595 | ECOD (1.6) |
C | PF13365 | e8f0aC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: PF13365 | ECOD (1.6) |
C | PF00595 | e8f0aC2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PF00595 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain | |
G [auth a], H [auth b], I [auth c] | PF00249 | Myb-like DNA-binding domain (Myb_DNA-binding) | Myb-like DNA-binding domain | This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. | Domain |
PF13365 | Trypsin-like peptidase domain (Trypsin_2) | Trypsin-like peptidase domain | This family includes trypsin-like peptidase domains. | Domain | |
PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR001940 | Peptidase S1C | Family | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR011782 | Peptidase S1C, Do | Family | |
IPR001478 | PDZ domain | Domain | |
G [auth a], H [auth b], I [auth c] | IPR017930 | Myb domain | Domain |
G [auth a], H [auth b], I [auth c] | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |
G [auth a], H [auth b], I [auth c] | IPR013867 | Telomere repeat-binding factor, dimerisation domain | Domain |
G [auth a], H [auth b], I [auth c] | IPR036507 | Telomere repeat-binding factor, dimerisation domain superfamily | Homologous Superfamily |
G [auth a], H [auth b], I [auth c] | IPR017357 | Telomeric repeat-binding factor 1/2 | Family |
G [auth a], H [auth b], I [auth c] | IPR001005 | SANT/Myb domain | Domain |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR001940 | Peptidase S1C | Family | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR011782 | Peptidase S1C, Do | Family | |
IPR001478 | PDZ domain | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
G [auth a], H [auth b], I [auth c] | P54274 | :