Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
ASCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
ASCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
BSCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
BSCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
CSCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
DSCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
DSCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFer4_20e8f5wA4 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
AFer4_21e8f5wA5 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
ADHO_dhe8f5wA1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
APyr_redox_2_3e8f5wA2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
APyr_redox_2e8f5wA3 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)
BFer4_20e8f5wB3 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
BFer4_21e8f5wB4 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
BDHO_dhe8f5wB2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
BPyr_redox_2_3e8f5wB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
BPyr_redox_2e8f5wB5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)
CFer4_20e8f5wC2 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
CFer4_21e8f5wC4 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
CDHO_dhe8f5wC1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
CPyr_redox_2_3e8f5wC5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
CPyr_redox_2e8f5wC3 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)
DFer4_20e8f5wD3 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
DFer4_21e8f5wD4 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
DDHO_dhe8f5wD1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
DPyr_redox_2_3e8f5wD5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
DPyr_redox_2e8f5wD2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF07992Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2)Pyridine nucleotide-disulphide oxidoreductaseThis family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.Domain
A, B, C, D
PF01180Dihydroorotate dehydrogenase (DHO_dh)Dihydroorotate dehydrogenase- Domain
A, B, C, D
PF14691Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster (Fer4_20)Dihydroprymidine dehydrogenase domain II, 4Fe-4S clusterDomain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyses the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds [1]. This doma ...Domain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyses the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds [1]. This domain carries two Fe4-S4 clusters.
Domain
A, B, C, D
PF146974Fe-4S dicluster domain (Fer4_21)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Dihydropyrimidine dehydrogenase [NADP(+)]