X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1nanovolume8.1277PEG 4000, glycerol, magnesium chloride, Tris, pH 8.1, nanovolume, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.3647.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 91.523α = 90
b = 92.274β = 90
c = 118.174γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42002-07-31MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.31.0ALS5.0.3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8525900.06410.84.4586600779442213.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.851.89930.4534.55314

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.85257324173241386889.790.171350.171350.169380.20836RANDOM13.859
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.08-1.65-0.43
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.523
r_scangle_it2.96
r_scbond_it1.879
r_angle_refined_deg1.112
r_mcangle_it0.885
r_mcbond_it0.443
r_nbd_refined0.194
r_symmetry_vdw_refined0.177
r_symmetry_hbond_refined0.164
r_xyhbond_nbd_refined0.119
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.523
r_scangle_it2.96
r_scbond_it1.879
r_angle_refined_deg1.112
r_mcangle_it0.885
r_mcbond_it0.443
r_nbd_refined0.194
r_symmetry_vdw_refined0.177
r_symmetry_hbond_refined0.164
r_xyhbond_nbd_refined0.119
r_chiral_restr0.075
r_bond_refined_d0.008
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7115
Nucleic Acid Atoms
Solvent Atoms700
Heterogen Atoms92

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SHELXSphasing