2JY6 | pdb_00002jy6

Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	20 MM sodium phosphate, 0.02% sodium azide	93% H2O/7% D2O	20 mM	6.8	ambient	296
2	2D 1H-15N IPAP HSQC	20 MM sodium phosphate, 0.02% sodium azide	93% H2O/7% D2O	20 mM	6.8	ambient	306
3	15N R1 AND R2	20 MM sodium phosphate, 0.02% sodium azide	93% H2O/7% D2O	20 mM	6.8	ambient	306
4	15N{1H} NOE	20 MM sodium phosphate, 0.02% sodium azide	93% H2O/7% D2O	20 mM	6.8	ambient	306
5	2D 1H-1H NOESY	20 MM sodium phosphate, 0.02% sodium azide	93% H2O/7% D2O	20 mM	6.8	ambient	306

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
simulated annealing, distance geometry		HADDOCK

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	500
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	HADDOCK		Bonvin, A. M.
2	geometry optimization	HADDOCK		Bonvin, A. M.
3	refinement	HADDOCK		Bonvin, A. M.

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.