2FLK

Crystal structure of CheY in complex with CheZ(200-214) solved from a F432 crystal grown in CAPS (pH 10.5)


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1FQWPDB ENTRY 1FQW

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP10.52982M ammonium sulfate, 0.2M lithium sulfate, 0.1M CAPS, pH 10.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 198.75α = 90
b = 198.75β = 90
c = 198.75γ = 90
Symmetry
Space GroupF 4 3 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42003-02-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X4A0.9793NSLSX4A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.12099.90.121.32021220143-327.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.12.1798.70.3586.31931

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1FQW2.119.961841017947168797.490.1980.197650.196650.20736RANDOM20.041
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg14.598
r_scangle_it4.095
r_dihedral_angle_1_deg3.258
r_scbond_it2.41
r_mcangle_it1.487
r_angle_other_deg1.434
r_angle_refined_deg1.184
r_mcbond_it0.744
r_nbd_refined0.236
r_symmetry_vdw_other0.215
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg14.598
r_scangle_it4.095
r_dihedral_angle_1_deg3.258
r_scbond_it2.41
r_mcangle_it1.487
r_angle_other_deg1.434
r_angle_refined_deg1.184
r_mcbond_it0.744
r_nbd_refined0.236
r_symmetry_vdw_other0.215
r_symmetry_vdw_refined0.208
r_nbd_other0.192
r_symmetry_hbond_refined0.181
r_xyhbond_nbd_refined0.125
r_xyhbond_nbd_other0.125
r_nbtor_other0.117
r_chiral_restr0.063
r_bond_refined_d0.011
r_gen_planes_refined0.006
r_gen_planes_other0.004
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1084
Nucleic Acid Atoms
Solvent Atoms80
Heterogen Atoms33

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement