X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
1.9737.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.59α = 90
b = 54.59β = 90
c = 107.09γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X122.00EMBL/DESY, HamburgX12

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.823017142

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.82301682531799.90.159070.158090.20814RANDOM22.835
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.04-0.02-0.040.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.223
r_dihedral_angle_4_deg28.083
r_dihedral_angle_3_deg13.434
r_dihedral_angle_1_deg6.447
r_scangle_it5.862
r_scbond_it4.091
r_mcangle_it2.033
r_angle_refined_deg1.677
r_mcbond_it1.182
r_angle_other_deg0.857
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.223
r_dihedral_angle_4_deg28.083
r_dihedral_angle_3_deg13.434
r_dihedral_angle_1_deg6.447
r_scangle_it5.862
r_scbond_it4.091
r_mcangle_it2.033
r_angle_refined_deg1.677
r_mcbond_it1.182
r_angle_other_deg0.857
r_symmetry_hbond_refined0.641
r_mcbond_other0.289
r_symmetry_vdw_refined0.286
r_symmetry_vdw_other0.262
r_nbd_refined0.197
r_nbd_other0.178
r_nbtor_refined0.177
r_xyhbond_nbd_refined0.143
r_chiral_restr0.119
r_metal_ion_refined0.118
r_nbtor_other0.09
r_bond_refined_d0.019
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1626
Nucleic Acid Atoms
Solvent Atoms130
Heterogen Atoms4

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
CCP4data scaling
FFTphasing