7AVJ

Streptococcal High Identity Repeats in Tandem (SHIRT) domain 2 from cell surface protein SGO_0707

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	7	291	0.1 M HEPES pH 7, 2.4 M Ammonium Sulphate

Crystal Properties
Matthews coefficient	Solvent content
1.87	34.36

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 21.429	α = 90
b = 40.766	β = 90
c = 82.469	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 6M		2014-12-07	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I03	0.85	Diamond	I03

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	0.95	82.48	95.2	0.034	0.999	24.8	6.3		44546			8.9

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	0.95	0.96	75.8		0.839	2.29

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	AB INITIO PHASING	THROUGHOUT	0.95	41.23	42240	2193	95.35	0.1253	0.1249	0.1329	RANDOM	15.717

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.02			0.58		-0.56

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	37.596
r_sphericity_free	22.789
r_sphericity_bonded	12.19
r_dihedral_angle_3_deg	12.078
r_dihedral_angle_1_deg	6.153
r_rigid_bond_restr	2.943
r_mcangle_it	2.809
r_angle_refined_deg	1.96
r_mcbond_it	1.896
r_mcbond_other	1.893

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	37.596
r_sphericity_free	22.789
r_sphericity_bonded	12.19
r_dihedral_angle_3_deg	12.078
r_dihedral_angle_1_deg	6.153
r_rigid_bond_restr	2.943
r_mcangle_it	2.809
r_angle_refined_deg	1.96
r_mcbond_it	1.896
r_mcbond_other	1.893
r_angle_other_deg	1.147
r_chiral_restr	0.128
r_bond_refined_d	0.017
r_gen_planes_refined	0.012
r_gen_planes_other	0.005
r_bond_other_d	0.002

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	540
Nucleic Acid Atoms
Solvent Atoms	104
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
XSCALE	data scaling
PDB_EXTRACT	data extraction
XDS	data reduction
Fragon	phasing

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.