ADP: ADENOSINE-5'-DIPHOSPHATE
ADP is a Ligand Of Interest in 1NY6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1NY6_ADP_I_8 | 58% | 24% | 0.179 | 0.959 | 1.49 | 1.59 | 4 | 3 | 5 | 0 | 100% | 1 |
1NY6_ADP_F_4 | 57% | 25% | 0.165 | 0.942 | 1.45 | 1.59 | 3 | 3 | 7 | 0 | 100% | 1 |
1NY6_ADP_E_3 | 56% | 24% | 0.184 | 0.957 | 1.52 | 1.61 | 5 | 1 | 3 | 0 | 100% | 1 |
1NY6_ADP_J_9 | 55% | 24% | 0.156 | 0.923 | 1.49 | 1.61 | 6 | 3 | 1 | 0 | 100% | 1 |
1NY6_ADP_C_1 | 55% | 26% | 0.192 | 0.96 | 1.47 | 1.55 | 3 | 1 | 4 | 0 | 100% | 1 |
1NY6_ADP_M_12 | 49% | 27% | 0.185 | 0.931 | 1.39 | 1.57 | 3 | 3 | 6 | 0 | 100% | 1 |
1NY6_ADP_G_5 | 47% | 22% | 0.192 | 0.93 | 1.48 | 1.73 | 3 | 4 | 0 | 0 | 100% | 1 |
1NY6_ADP_L_11 | 46% | 24% | 0.199 | 0.935 | 1.56 | 1.56 | 6 | 2 | 6 | 0 | 100% | 1 |
1NY6_ADP_A_6 | 44% | 22% | 0.204 | 0.931 | 1.59 | 1.67 | 5 | 3 | 2 | 0 | 100% | 1 |
1NY6_ADP_N_13 | 43% | 25% | 0.183 | 0.906 | 1.49 | 1.55 | 5 | 2 | 2 | 0 | 100% | 1 |
1NY6_ADP_B_7 | 38% | 23% | 0.211 | 0.912 | 1.52 | 1.65 | 5 | 3 | 1 | 0 | 100% | 1 |
1NY6_ADP_K_10 | 36% | 23% | 0.21 | 0.905 | 1.55 | 1.63 | 5 | 3 | 1 | 0 | 100% | 1 |
1NY6_ADP_D_2 | 36% | 23% | 0.222 | 0.916 | 1.48 | 1.67 | 5 | 4 | 6 | 0 | 100% | 1 |
1NY6_ADP_H_14 | 31% | 24% | 0.245 | 0.916 | 1.53 | 1.56 | 5 | 2 | 3 | 0 | 100% | 1 |
4LZZ_ADP_L_400 | 43% | 37% | 0.218 | 0.943 | 1.01 | 1.45 | 2 | 4 | 1 | 0 | 100% | 1 |
4LY6_ADP_L_400 | 29% | 38% | 0.209 | 0.869 | 0.95 | 1.47 | 1 | 4 | 3 | 0 | 100% | 0.84 |
3KB1_ADP_A_301 | 100% | 22% | 0.021 | 0.996 | 2.06 | 1.21 | 6 | 4 | 1 | 0 | 100% | 1 |
5GZA_ADP_A_401 | 100% | 2% | 0.019 | 0.997 | 3.36 | 3.39 | 13 | 11 | 1 | 0 | 100% | 1 |
5KHW_ADP_A_1201 | 100% | 41% | 0.023 | 0.995 | 1.1 | 1.2 | 1 | 2 | 0 | 0 | 100% | 1 |
8VZA_ADP_A_603 | 100% | 37% | 0.024 | 0.995 | 0.96 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
1PHP_ADP_A_396 | 100% | 24% | 0.026 | 0.995 | 1.29 | 1.8 | 3 | 11 | 1 | 0 | 100% | 1 |