NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2VSC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2VSC_NAG_C_1116 | 81% | 38% | 0.092 | 0.943 | 0.58 | 1.82 | - | 5 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_C_1119 | 63% | 58% | 0.113 | 0.907 | 0.45 | 1.16 | - | 1 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_B_1116 | 63% | 52% | 0.128 | 0.922 | 0.63 | 1.2 | - | 1 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_B_1117 | 41% | 65% | 0.136 | 0.851 | 0.37 | 0.97 | - | 1 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_D_1118 | 41% | 67% | 0.127 | 0.84 | 0.41 | 0.84 | - | 1 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_C_1117 | 20% | 41% | 0.24 | 0.845 | 0.68 | 1.58 | 1 | 2 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_A_1116 | 18% | 67% | 0.143 | 0.726 | 0.51 | 0.77 | - | 1 | 1 | 0 | 100% | 0.9333 |
2VSC_NAG_D_1117 | 12% | 54% | 0.162 | 0.687 | 0.51 | 1.25 | - | 1 | 1 | 0 | 100% | 0.9333 |
2VSC_NAG_A_1119 | 11% | 54% | 0.283 | 0.803 | 0.43 | 1.33 | - | 1 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_C_1118 | 10% | 51% | 0.291 | 0.794 | 0.47 | 1.4 | - | 3 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_A_1118 | 6% | 54% | 0.27 | 0.706 | 0.45 | 1.29 | - | 3 | 0 | 0 | 100% | 0.9333 |
2VSC_NAG_A_1117 | 3% | 49% | 0.318 | 0.631 | 0.5 | 1.46 | - | 2 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |
5U7O_NAG_B_704 | 100% | 88% | 0.024 | 0.989 | 0.23 | 0.44 | - | - | 0 | 0 | 100% | 0.9333 |