NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2VSM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2VSM_NAG_A_1605 | 65% | 51% | 0.126 | 0.927 | 0.61 | 1.26 | - | 2 | 2 | 0 | 100% | 0.9333 |
2VSM_NAG_A_1607 | 43% | 48% | 0.184 | 0.906 | 0.55 | 1.42 | - | 3 | 0 | 0 | 100% | 0.9333 |
2VSM_NAG_A_1606 | 33% | 28% | 0.185 | 0.863 | 0.66 | 2.2 | - | 6 | 0 | 0 | 100% | 0.9333 |
2VSM_NAG_B_1171 | 20% | 34% | 0.243 | 0.846 | 0.65 | 1.94 | - | 2 | 1 | 0 | 100% | 0.9333 |
2VWD_NAG_B_1611 | 86% | 63% | 0.093 | 0.962 | 0.56 | 0.86 | - | - | 0 | 0 | 100% | 0.9333 |
8JA5_NAG_A_701 | 18% | 71% | 0.336 | 0.926 | 0.39 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
3D12_NAG_A_1210 | 16% | 20% | 0.297 | 0.867 | 1.77 | 1.61 | 3 | 4 | 0 | 0 | 100% | 0.9333 |
3D11_NAG_A_1210 | 1% | 53% | 0.532 | 0.729 | 0.46 | 1.32 | - | 3 | 1 | 1 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
4AKM_NAG_A_1379 | 100% | 67% | 0.029 | 0.994 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3RIK_NAG_D_509 | 100% | 8% | 0.035 | 0.991 | 2.03 | 2.54 | 4 | 7 | 2 | 0 | 100% | 0.9333 |
5VEM_NAG_B_509 | 100% | 74% | 0.003 | 0.957 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |