Ligand validation:3HW3


U5P: URIDINE-5'-MONOPHOSPHATE

U5P is a Ligand Of Interest in 3HW3 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3HW3_U5P_A_257Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3HW3_U5P_A_257Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3HW3_U5P_A_257Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3HW3_U5P_A_257 14% 7% 0.242 0.7952.03 2.81 8 1660100%1
4AWH_U5P_B_910 94% 64% 0.073 0.9740.46 0.89 - 300100%1
3G1X_U5P_A_229 100% 48% 0.021 0.9961.08 0.92 1 200100%1
3W07_U5P_A_301 100% 55% 0.037 0.9970.79 0.96 - -30100%1
4MML_U5P_A_103 100% 83% 0.026 0.9940.29 0.49 - -1095%0.9524
6YWU_U5P_A_501 100% 40% 0.036 0.9941.2 1.13 2 100100%1
2E6Y_U5P_B_302 100% 49% 0.04 0.9931.11 0.85 1 110100%1