Ligand validation:4DVK

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4DVK designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4DVK_NAG_A_1107	46%	46%	0.144	0.879	0.99	1.1	1	2	1	0	100%	0.7653
4DVK_NAG_B_1114	31%	54%	0.235	0.903	0.97	0.82	1	-	0	0	100%	0.7467
4DVK_NAG_A_1109	23%	18%	0.174	0.794	1.16	2.32	1	7	0	0	100%	0.8773
4DVK_NAG_B_1108	20%	49%	0.173	0.773	0.97	1.01	1	2	1	0	100%	0.7373
4DVK_NAG_B_1109	7%	21%	0.212	0.66	1.02	2.26	1	4	0	0	100%	0.8027
4DVK_NAG_A_1108	3%	25%	0.314	0.662	1.04	1.99	1	4	0	0	100%	0.7653
4DW3_NAG_A_1106	68%	42%	0.129	0.939	1.14	1.1	-	1	0	0	100%	0.762
4DWC_NAG_B_1108	63%	72%	0.139	0.933	0.26	0.82	-	1	0	0	100%	0.7373
4DVN_NAG_B_1106	60%	72%	0.132	0.918	0.23	0.83	-	1	0	0	100%	0.7653
4DWA_NAG_B_1109	53%	69%	0.165	0.926	0.28	0.88	-	1	1	0	100%	0.756
4DW5_NAG_B_203	52%	35%	0.135	0.893	0.99	1.54	1	4	1	0	100%	0.7213
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.