8DG: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
8DG is a Ligand Of Interest in 4UBC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4UBC_8DG_A_401 | 88% | 55% | 0.105 | 0.981 | 0.74 | 1.01 | - | 3 | 0 | 0 | 100% | 1 |
4UAZ_8DG_A_403 | 90% | 46% | 0.089 | 0.971 | 0.87 | 1.19 | - | 5 | 0 | 0 | 100% | 0.4 |
4UAW_8DG_A_401 | 88% | 43% | 0.103 | 0.978 | 0.88 | 1.32 | - | 6 | 0 | 0 | 100% | 1 |
4UBB_8DG_A_401 | 87% | 53% | 0.1 | 0.972 | 0.86 | 0.95 | - | - | 1 | 0 | 100% | 0.6 |
3MBY_8DG_A_338 | 84% | 56% | 0.097 | 0.96 | 0.68 | 1.02 | - | 3 | 1 | 0 | 100% | 1 |
4UB5_8DG_A_403 | 83% | 52% | 0.099 | 0.957 | 0.92 | 0.95 | 1 | 2 | 0 | 0 | 100% | 1 |
7KT3_8DG_A_501 | 98% | 29% | 0.058 | 0.984 | 1.24 | 1.57 | 4 | 5 | 0 | 0 | 100% | 1 |
7KTJ_8DG_A_506 | 98% | 43% | 0.064 | 0.987 | 0.86 | 1.32 | - | 3 | 0 | 0 | 100% | 1 |
5GG6_8DG_A_401 | 98% | 8% | 0.059 | 0.979 | 2.02 | 2.55 | 6 | 12 | 0 | 0 | 100% | 1 |
4XA5_8DG_A_601 | 94% | 8% | 0.064 | 0.963 | 2.14 | 2.42 | 8 | 12 | 0 | 0 | 100% | 0.94 |
5GG8_8DG_A_401 | 94% | 6% | 0.079 | 0.978 | 1.97 | 2.97 | 6 | 12 | 1 | 0 | 100% | 1 |