UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE
UPG is a Ligand Of Interest in 4Y6U designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4Y6U_UPG_A_404 | 88% | 36% | 0.112 | 0.989 | 0.86 | 1.64 | - | 10 | 0 | 0 | 100% | 1 |
4Y7G_UPG_A_403 | 84% | 38% | 0.119 | 0.98 | 0.89 | 1.51 | 1 | 8 | 1 | 0 | 100% | 1 |
5JSX_UPG_A_402 | 81% | 29% | 0.134 | 0.987 | 0.98 | 1.85 | 2 | 10 | 2 | 0 | 100% | 1 |
4Y6N_UPG_A_403 | 65% | 39% | 0.158 | 0.96 | 0.92 | 1.45 | 1 | 9 | 3 | 0 | 100% | 0.88 |
4Y7F_UPG_A_403 | 53% | 36% | 0.224 | 0.988 | 0.99 | 1.5 | 3 | 10 | 0 | 0 | 100% | 1 |
3JSZ_UPG_A_526 | 100% | 39% | 0.042 | 0.983 | 0.94 | 1.41 | 1 | 5 | 0 | 0 | 100% | 1 |
2Q3E_UPG_C_501 | 99% | 41% | 0.057 | 0.987 | 0.93 | 1.37 | - | 6 | 2 | 0 | 100% | 1 |
8UAG_UPG_A_504 | 99% | 5% | 0.049 | 0.978 | 3.87 | 1.44 | 16 | 5 | 0 | 0 | 100% | 1 |
6K0I_UPG_A_402 | 98% | 27% | 0.057 | 0.98 | 1.31 | 1.63 | 5 | 11 | 2 | 0 | 100% | 1 |
1EK6_UPG_A_401 | 98% | 48% | 0.061 | 0.982 | 0.89 | 1.12 | - | 3 | 1 | 0 | 100% | 1 |