Ligand validation:5D5S

PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 5D5S designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5D5S_PLP_A_403	63%	10%	0.149	0.945	2.98	1.33	3	1	0	0	100%	0.685
5K30_PLP_A_401	95%	22%	0.071	0.975	2.18	1.12	5	2	1	0	100%	0.9375
5M3Z_PLP_A_401	93%	17%	0.082	0.976	2.08	1.54	4	4	1	0	100%	0.6562
6S0C_PLP_A_402	90%	23%	0.087	0.97	2.08	1.12	4	2	1	0	100%	0.9375
5E4Z_PLP_A_404	81%	21%	0.121	0.975	2.26	1.1	6	2	0	0	100%	0.9375
6EGR_PLP_A_400	80%	21%	0.105	0.953	2.05	1.29	4	4	1	0	100%	0.9375
2BIE_PLP_B_1361	100%	28%	0.039	0.989	1.48	1.39	4	3	1	0	100%	0.9375
9J0V_PLP_A_301	100%	36%	0.037	0.987	0.82	1.68	-	5	0	0	100%	0.9375
4NOG_PLP_A_501	100%	38%	0.042	0.992	1.24	1.18	3	1	0	0	100%	1
3WQC_PLP_B_402	100%	21%	0.045	0.993	1.96	1.38	4	4	0	0	100%	0.9375
4HT3_PLP_B_401	100%	15%	0.045	0.993	2.04	1.72	3	5	0	0	100%	0.9375

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.