5FMD
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5FMD designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5FMD_NAG_A_1357 | 81% | 55% | 0.095 | 0.948 | 0.37 | 1.36 | - | 3 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1471 | 78% | 69% | 0.094 | 0.937 | 0.35 | 0.83 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1471 | 76% | 60% | 0.093 | 0.929 | 0.33 | 1.19 | - | 2 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1444 | 76% | 67% | 0.094 | 0.928 | 0.48 | 0.77 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1444 | 74% | 61% | 0.1 | 0.93 | 0.53 | 0.94 | - | 1 | 2 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1644 | 70% | 70% | 0.115 | 0.933 | 0.44 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1357 | 60% | 70% | 0.132 | 0.918 | 0.32 | 0.81 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1644 | 57% | 71% | 0.131 | 0.906 | 0.4 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1236 | 40% | 68% | 0.147 | 0.856 | 0.39 | 0.84 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1483 | 38% | 73% | 0.176 | 0.878 | 0.32 | 0.7 | - | 1 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1555 | 31% | 69% | 0.184 | 0.85 | 0.38 | 0.82 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1483 | 20% | 68% | 0.251 | 0.853 | 0.28 | 0.94 | - | 1 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1539 | 17% | 56% | 0.23 | 0.807 | 0.52 | 1.16 | - | 2 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1539 | 7% | 62% | 0.308 | 0.766 | 0.45 | 0.98 | - | 1 | 1 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1319 | 6% | 70% | 0.387 | 0.832 | 0.33 | 0.81 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1555 | 6% | 59% | 0.288 | 0.723 | 0.32 | 1.24 | - | 3 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1052 | 5% | 63% | 0.357 | 0.77 | 0.28 | 1.13 | - | 2 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1125 | 4% | 56% | 0.347 | 0.721 | 0.44 | 1.24 | - | 1 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1242 | 4% | 66% | 0.382 | 0.747 | 0.26 | 1.03 | - | 1 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1512 | 3% | 55% | 0.342 | 0.676 | 0.35 | 1.36 | - | 4 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1319 | 3% | 67% | 0.481 | 0.817 | 0.43 | 0.82 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1052 | 3% | 70% | 0.398 | 0.726 | 0.33 | 0.81 | - | - | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1606 | 3% | 36% | 0.334 | 0.655 | 0.48 | 1.99 | - | 6 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1242 | 2% | 59% | 0.455 | 0.695 | 0.29 | 1.25 | - | 3 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_A_1215 | 1% | 43% | 0.48 | 0.675 | 0.54 | 1.62 | - | 2 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1215 | 1% | 59% | 0.491 | 0.629 | 0.45 | 1.09 | - | 1 | 0 | 0 | 100% | 0.9333 |
5FMD_NAG_B_1125 | 1% | 60% | 0.421 | 0.531 | 0.47 | 1.06 | - | 1 | 0 | 0 | 100% | 0.9333 |
5O47_NAG_B_1444 | 91% | 65% | 0.078 | 0.964 | 0.4 | 0.94 | - | 1 | 1 | 0 | 100% | 0.9333 |
6S82_NAG_A_1444 | 91% | 48% | 0.084 | 0.969 | 0.89 | 1.13 | - | 2 | 0 | 0 | 100% | 0.9333 |
6S3Z_NAG_A_1357 | 91% | 47% | 0.088 | 0.973 | 0.75 | 1.28 | - | 2 | 0 | 0 | 100% | 0.9333 |
5ANN_NAG_B_1471 | 89% | 60% | 0.084 | 0.962 | 0.56 | 0.97 | - | 1 | 0 | 0 | 100% | 0.9333 |
5FK7_NAG_A_1471 | 88% | 56% | 0.079 | 0.955 | 0.29 | 1.36 | - | 4 | 1 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |