Ligand validation:5JDF

MYS: PENTADECANE

MYS is a Ligand Of Interest in 5JDF designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JDF_MYS_A_412	12%	71%	0.264	0.873	0.35	0.76	-	-	1	0	53%	1
5JDF_MYS_A_411	8%	68%	0.296	0.766	0.34	0.87	-	-	1	0	100%	1
5JDF_MYS_A_413	2%	35%	0.354	0.677	0.59	1.93	-	3	2	0	73%	1
5JDF_MYS_A_409	0%	78%	0.269	0.426	0.41	0.47	-	-	0	0	33%	1
5JDF_MYS_A_410	0%	71%	0.614	0.645	0.34	0.77	-	-	1	0	60%	1
5JDF_MYS_A_408	0%	78%	0.547	0.573	0.36	0.54	-	-	0	0	33%	1
5HYA_MYS_A_413	42%	93%	0.144	0.9	0.12	0.36	-	-	1	0	80%	1
3V5U_MYS_A_714	31%	66%	0.156	0.858	0.41	0.88	-	-	3	0	80%	1
5HXH_MYS_A_404	30%	70%	0.142	0.923	0.45	0.7	-	-	0	0	33%	1
5JDG_MYS_A_423	26%	69%	0.154	0.927	0.44	0.73	-	-	0	0	27%	1
5HXE_MYS_A_410	24%	69%	0.183	0.81	0.37	0.83	-	-	0	0	100%	1
6GAD_MYS_A_308	71%	76%	0.088	0.908	0.09	0.85	-	-	0	0	100%	1
6GAE_MYS_A_308	68%	76%	0.089	0.9	0.09	0.85	-	-	0	0	100%	1
6GAC_MYS_A_308	67%	76%	0.089	0.896	0.09	0.85	-	-	0	0	100%	1
6GAG_MYS_A_308	67%	76%	0.091	0.897	0.09	0.85	-	-	0	0	100%	1
6GA9_MYS_A_308	66%	76%	0.094	0.898	0.09	0.85	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.