NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5M8R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5M8R_NAG_A_505 | 56% | 64% | 0.14 | 0.913 | 0.6 | 0.76 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_A_507 | 56% | 62% | 0.141 | 0.911 | 0.69 | 0.76 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_D_504 | 51% | 76% | 0.182 | 0.936 | 0.3 | 0.65 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_D_506 | 48% | 70% | 0.165 | 0.908 | 0.32 | 0.82 | - | 1 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_C_513 | 46% | 53% | 0.171 | 0.906 | 1.1 | 0.74 | 1 | 1 | 2 | 0 | 100% | 0.9333 |
5M8R_NAG_B_511 | 39% | 70% | 0.182 | 0.889 | 0.51 | 0.65 | - | 1 | 2 | 0 | 100% | 0.9333 |
5M8R_NAG_D_505 | 39% | 68% | 0.165 | 0.869 | 0.62 | 0.61 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_A_506 | 31% | 71% | 0.172 | 0.841 | 0.57 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_B_504 | 20% | 27% | 0.187 | 0.791 | 1.67 | 1.3 | 3 | 2 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_D_503 | 17% | 39% | 0.193 | 0.769 | 1.25 | 1.12 | 2 | 2 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_A_504 | 11% | 30% | 0.243 | 0.761 | 1.35 | 1.42 | 2 | 2 | 0 | 0 | 100% | 0.9333 |
5M8S_NAG_C_503 | 48% | 81% | 0.129 | 0.872 | 0.31 | 0.5 | - | - | 0 | 0 | 100% | 0.9333 |
5M8T_NAG_A_508 | 44% | 70% | 0.174 | 0.902 | 0.56 | 0.6 | - | - | 0 | 0 | 100% | 0.9333 |
5M8L_NAG_C_511 | 42% | 67% | 0.159 | 0.877 | 0.48 | 0.79 | - | 1 | 0 | 0 | 100% | 0.9333 |
5M8Q_NAG_C_511 | 39% | 64% | 0.207 | 0.916 | 0.67 | 0.72 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
5M8N_NAG_D_512 | 27% | 53% | 0.23 | 0.876 | 0.51 | 1.27 | - | 2 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |