8DG: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
8DG is a Ligand Of Interest in 5MZE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5MZE_8DG_D_202 | 77% | 7% | 0.101 | 0.941 | 2.08 | 2.77 | 7 | 19 | 0 | 0 | 100% | 0.8594 |
5MZE_8DG_C_202 | 73% | 6% | 0.119 | 0.945 | 2.04 | 3.01 | 7 | 17 | 0 | 0 | 100% | 0.8594 |
5MZE_8DG_A_204 | 70% | 7% | 0.122 | 0.939 | 2 | 2.76 | 6 | 21 | 1 | 0 | 100% | 0.8594 |
5MZE_8DG_B_203 | 46% | 9% | 0.176 | 0.911 | 2.2 | 2.26 | 7 | 18 | 0 | 0 | 100% | 0.9375 |
7KT3_8DG_A_501 | 98% | 29% | 0.058 | 0.984 | 1.24 | 1.57 | 4 | 5 | 0 | 0 | 100% | 1 |
7KTJ_8DG_A_506 | 98% | 43% | 0.064 | 0.987 | 0.86 | 1.32 | - | 3 | 0 | 0 | 100% | 1 |
5GG6_8DG_A_401 | 98% | 8% | 0.059 | 0.979 | 2.02 | 2.55 | 6 | 12 | 0 | 0 | 100% | 1 |
5GG8_8DG_A_401 | 94% | 6% | 0.079 | 0.978 | 1.97 | 2.97 | 6 | 12 | 1 | 0 | 100% | 1 |
7X9H_8DG_A_202 | 93% | 22% | 0.075 | 0.969 | 0.97 | 2.26 | 2 | 13 | 0 | 0 | 100% | 0.7 |