5OBM
LLL: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL
LLL is a Ligand Of Interest in 5OBM designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5OBM_LLL_1_3991 | 49% | 73% | 0.211 | 0.961 | 0.2 | 0.82 | - | 3 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_5_4163 | 49% | 68% | 0.172 | 0.92 | 0.15 | 1.06 | - | 3 | 0 | 0 | 100% | 1 |
5OBM_LLL_1_3989 | 48% | 57% | 0.206 | 0.95 | 0.21 | 1.43 | - | 3 | 0 | 0 | 100% | 1 |
5OBM_LLL_5_4162 | 47% | 73% | 0.156 | 0.896 | 0.18 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |
5OBM_LLL_1_3990 | 46% | 45% | 0.202 | 0.94 | 0.25 | 1.82 | - | 1 | 0 | 0 | 100% | 0.98 |
5OBM_LLL_l3_412 | 46% | 44% | 0.204 | 0.942 | 0.25 | 1.88 | - | 3 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_1_3993 | 46% | 55% | 0.22 | 0.956 | 0.24 | 1.47 | - | 5 | 0 | 0 | 100% | 0.97 |
5OBM_LLL_5_4151 | 46% | 53% | 0.222 | 0.958 | 0.32 | 1.46 | - | 2 | 0 | 0 | 100% | 0.99 |
5OBM_LLL_5_4167 | 45% | 70% | 0.165 | 0.895 | 0.15 | 1 | - | 2 | 0 | 0 | 100% | 1 |
5OBM_LLL_6_2169 | 44% | 73% | 0.203 | 0.933 | 0.14 | 0.89 | - | 2 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_6_2171 | 44% | 66% | 0.206 | 0.934 | 0.14 | 1.14 | - | 1 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_6_2170 | 44% | 61% | 0.194 | 0.921 | 0.23 | 1.25 | - | 2 | 0 | 0 | 100% | 1 |
5OBM_LLL_5_4172 | 43% | 58% | 0.184 | 0.909 | 0.22 | 1.36 | - | 3 | 0 | 0 | 100% | 0.86 |
5OBM_LLL_5_4165 | 43% | 68% | 0.209 | 0.934 | 0.16 | 1.04 | - | 2 | 0 | 0 | 100% | 0.93 |
5OBM_LLL_5_4161 | 43% | 62% | 0.222 | 0.946 | 0.19 | 1.25 | - | 3 | 0 | 0 | 100% | 1 |
5OBM_LLL_5_4170 | 43% | 54% | 0.208 | 0.931 | 0.24 | 1.52 | - | 2 | 0 | 0 | 100% | 0.76 |
5OBM_LLL_5_4157 | 39% | 63% | 0.25 | 0.959 | 0.25 | 1.13 | - | 2 | 0 | 0 | 100% | 1 |
5OBM_LLL_5_4159 | 38% | 66% | 0.23 | 0.933 | 0.21 | 1.06 | - | 3 | 0 | 0 | 100% | 0.9 |
5OBM_LLL_1_4003 | 37% | 59% | 0.228 | 0.929 | 0.18 | 1.37 | - | 3 | 0 | 0 | 100% | 0.78 |
5OBM_LLL_1_3994 | 37% | 64% | 0.232 | 0.932 | 0.2 | 1.14 | - | 3 | 0 | 0 | 100% | 0.97 |
5OBM_LLL_L3_404 | 37% | 59% | 0.222 | 0.919 | 0.22 | 1.33 | - | 3 | 0 | 0 | 100% | 1 |
5OBM_LLL_6_2165 | 36% | 64% | 0.221 | 0.917 | 0.21 | 1.14 | - | 2 | 0 | 0 | 100% | 0.86 |
5OBM_LLL_5_4154 | 36% | 76% | 0.251 | 0.945 | 0.25 | 0.68 | - | - | 0 | 0 | 100% | 0.92 |
5OBM_LLL_7_231 | 33% | 42% | 0.197 | 0.875 | 0.17 | 2.01 | - | 7 | 0 | 0 | 100% | 0.83 |
5OBM_LLL_6_2166 | 33% | 65% | 0.262 | 0.942 | 0.2 | 1.11 | - | 3 | 0 | 0 | 100% | 0.88 |
5OBM_LLL_8_221 | 32% | 49% | 0.223 | 0.898 | 0.21 | 1.73 | - | 2 | 0 | 0 | 100% | 0.88 |
5OBM_LLL_5_4164 | 32% | 43% | 0.234 | 0.909 | 0.21 | 1.93 | - | 3 | 0 | 0 | 100% | 0.68 |
5OBM_LLL_5_4160 | 31% | 44% | 0.276 | 0.948 | 0.24 | 1.86 | - | 3 | 0 | 0 | 100% | 0.78 |
5OBM_LLL_1_4004 | 31% | 66% | 0.226 | 0.895 | 0.19 | 1.08 | - | 1 | 0 | 0 | 100% | 0.84 |
5OBM_LLL_3_220 | 31% | 55% | 0.237 | 0.905 | 0.21 | 1.5 | - | 3 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_6_2176 | 30% | 60% | 0.242 | 0.905 | 0.22 | 1.29 | - | 3 | 0 | 0 | 100% | 0.8 |
5OBM_LLL_5_4168 | 29% | 50% | 0.27 | 0.932 | 0.2 | 1.67 | - | 3 | 0 | 0 | 100% | 0.91 |
5OBM_LLL_1_4001 | 29% | 67% | 0.218 | 0.875 | 0.17 | 1.08 | - | 2 | 0 | 0 | 100% | 1 |
5OBM_LLL_6_2168 | 28% | 60% | 0.243 | 0.895 | 0.21 | 1.28 | - | 3 | 0 | 0 | 100% | 1 |
5OBM_LLL_5_4152 | 27% | 56% | 0.269 | 0.916 | 0.18 | 1.48 | - | 2 | 0 | 0 | 100% | 0.82 |
5OBM_LLL_6_2164 | 26% | 47% | 0.266 | 0.91 | 0.18 | 1.82 | - | 2 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_6_2172 | 26% | 65% | 0.256 | 0.897 | 0.19 | 1.12 | - | 2 | 0 | 0 | 100% | 0.91 |
5OBM_LLL_1_3995 | 25% | 41% | 0.242 | 0.879 | 0.16 | 2.08 | - | 2 | 0 | 0 | 100% | 0.99 |
5OBM_LLL_5_4153 | 25% | 46% | 0.275 | 0.913 | 0.25 | 1.79 | - | 2 | 0 | 0 | 100% | 0.94 |
5OBM_LLL_5_4166 | 24% | 65% | 0.263 | 0.894 | 0.15 | 1.16 | - | 2 | 0 | 0 | 100% | 0.75 |
5OBM_LLL_5_4171 | 23% | 69% | 0.243 | 0.867 | 0.19 | 0.97 | - | 1 | 0 | 0 | 100% | 0.9 |
5OBM_LLL_2_2043 | 23% | 75% | 0.312 | 0.937 | 0.17 | 0.79 | - | 3 | 0 | 0 | 100% | 0.96 |
5OBM_LLL_5_4158 | 22% | 42% | 0.278 | 0.893 | 0.21 | 1.99 | - | 5 | 0 | 0 | 100% | 0.71 |
5OBM_LLL_7_233 | 21% | 70% | 0.232 | 0.84 | 0.22 | 0.93 | - | 2 | 0 | 0 | 100% | 0.66 |
5OBM_LLL_1_3992 | 20% | 62% | 0.321 | 0.926 | 0.21 | 1.23 | - | 2 | 0 | 0 | 100% | 0.89 |
5OBM_LLL_1_3999 | 20% | 70% | 0.291 | 0.894 | 0.17 | 0.97 | - | 2 | 0 | 0 | 100% | 0.72 |
5OBM_LLL_1_3996 | 20% | 71% | 0.28 | 0.882 | 0.21 | 0.89 | - | 2 | 0 | 0 | 100% | 0.88 |
5OBM_LLL_2_2044 | 17% | 55% | 0.281 | 0.865 | 0.2 | 1.5 | - | 4 | 0 | 0 | 100% | 1 |
5OBM_LLL_5_4156 | 17% | 60% | 0.282 | 0.858 | 0.22 | 1.29 | - | 3 | 0 | 0 | 100% | 0.83 |
5OBM_LLL_5_4155 | 16% | 67% | 0.301 | 0.869 | 0.24 | 1 | - | 1 | 0 | 0 | 100% | 0.91 |
5OBM_LLL_5_4176 | 16% | 61% | 0.272 | 0.839 | 0.22 | 1.26 | - | 3 | 0 | 0 | 100% | 0.68 |
5OBM_LLL_5_4175 | 15% | 56% | 0.289 | 0.855 | 0.23 | 1.44 | - | 3 | 0 | 0 | 100% | 0.67 |
5OBM_LLL_5_4169 | 15% | 56% | 0.309 | 0.871 | 0.2 | 1.46 | - | 4 | 0 | 0 | 100% | 0.72 |
5OBM_LLL_6_2167 | 15% | 43% | 0.35 | 0.91 | 0.21 | 1.96 | - | 5 | 0 | 0 | 100% | 0.97 |
5OBM_LLL_6_2175 | 14% | 59% | 0.296 | 0.854 | 0.18 | 1.37 | - | 2 | 0 | 0 | 100% | 0.68 |
5OBM_LLL_1_4000 | 14% | 40% | 0.288 | 0.842 | 0.18 | 2.11 | - | 5 | 0 | 0 | 100% | 0.8 |
5OBM_LLL_6_2174 | 13% | 59% | 0.293 | 0.832 | 0.27 | 1.27 | - | 3 | 0 | 0 | 100% | 0.75 |
5OBM_LLL_5_4177 | 13% | 46% | 0.321 | 0.859 | 0.26 | 1.79 | - | 6 | 0 | 0 | 100% | 0.67 |
5OBM_LLL_8_222 | 13% | 75% | 0.363 | 0.902 | 0.16 | 0.79 | - | 1 | 0 | 0 | 100% | 0.88 |
5OBM_LLL_5_4174 | 12% | 52% | 0.333 | 0.87 | 0.24 | 1.58 | - | 4 | 0 | 0 | 100% | 0.64 |
5OBM_LLL_5_4173 | 12% | 66% | 0.304 | 0.834 | 0.17 | 1.12 | - | 3 | 0 | 0 | 100% | 0.82 |
5OBM_LLL_1_3998 | 12% | 77% | 0.355 | 0.886 | 0.15 | 0.76 | - | 1 | 0 | 0 | 100% | 0.88 |
5OBM_LLL_7_232 | 11% | 72% | 0.345 | 0.863 | 0.17 | 0.9 | - | 2 | 0 | 0 | 100% | 0.72 |
5OBM_LLL_1_3997 | 11% | 62% | 0.359 | 0.877 | 0.19 | 1.22 | - | 3 | 0 | 0 | 100% | 0.96 |
5OBM_LLL_6_2173 | 10% | 66% | 0.351 | 0.862 | 0.19 | 1.11 | - | 3 | 0 | 0 | 100% | 0.89 |
5OBM_LLL_1_4002 | 9% | 39% | 0.355 | 0.854 | 0.2 | 2.11 | - | 3 | 0 | 0 | 100% | 1 |
5OBM_LLL_4_224 | 9% | 56% | 0.357 | 0.853 | 0.2 | 1.46 | - | 2 | 0 | 0 | 100% | 0.9 |
5OBM_LLL_5_4178 | 6% | 72% | 0.348 | 0.792 | 0.2 | 0.86 | - | 1 | 0 | 0 | 100% | 0.67 |
5OBM_LLL_2_2045 | 6% | 55% | 0.415 | 0.86 | 0.19 | 1.53 | - | 4 | 0 | 0 | 100% | 0.92 |
6NP3_LLL_A_301 | 92% | 52% | 0.078 | 0.967 | 0.62 | 1.22 | - | 4 | 0 | 0 | 100% | 19 |
7UUJ_LLL_B_301 | 84% | 21% | 0.08 | 0.941 | 1.2 | 2.08 | 3 | 12 | 1 | 0 | 100% | 1 |
3HAM_LLL_A_500 | 75% | 36% | 0.11 | 0.944 | 0.7 | 1.77 | - | 3 | 2 | 0 | 100% | 1 |
6MN1_LLL_B_302 | 64% | 45% | 0.127 | 0.925 | 0.91 | 1.21 | 1 | 4 | 0 | 0 | 100% | 1 |
4LF9_LLL_A_1743 | 50% | 34% | 0.212 | 0.964 | 1.35 | 1.27 | 3 | 6 | 2 | 0 | 100% | 1 |