5AD: 5'-DEOXYADENOSINE
5AD is a Ligand Of Interest in 5VSM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VSM_5AD_B_402 | 84% | 21% | 0.092 | 0.955 | 1.01 | 2.26 | - | 6 | 0 | 0 | 100% | 1 |
5VSM_5AD_A_402 | 84% | 21% | 0.097 | 0.958 | 1.09 | 2.22 | 1 | 4 | 0 | 0 | 100% | 1 |
5HR6_5AD_A_503 | 100% | 15% | 0.031 | 0.996 | 0.97 | 2.72 | 1 | 5 | 1 | 0 | 100% | 1 |
3IIX_5AD_A_1501 | 100% | 35% | 0.038 | 0.982 | 1 | 1.55 | 2 | 2 | 1 | 0 | 100% | 1 |
5FEZ_5AD_A_408 | 98% | 30% | 0.053 | 0.977 | 1.19 | 1.57 | 2 | 3 | 1 | 0 | 100% | 1 |
8JBS_5AD_B_302 | 98% | 55% | 0.053 | 0.974 | 0.65 | 1.08 | - | 2 | 1 | 0 | 100% | 1 |
5YRV_5AD_G_605 | 98% | 28% | 0.062 | 0.981 | 1.02 | 1.85 | 1 | 3 | 2 | 0 | 100% | 1 |