XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 5XSS designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5XSS_XYP_X_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5XSS_XYP_X_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5XSS_XYP_X_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5XSS_XYP_X_401 71% 77% 0.126 0.9480.47 0.45 - -00100%1
5XSS_XYP_B_401 71% 77% 0.14 0.960.47 0.45 - -00100%1
5XSS_XYP_A_501 63% 20% 0.177 0.9741.74 1.68 2 400100%1
5XSS_XYP_C_500 52% 77% 0.192 0.9510.47 0.45 - -00100%1
5XSJ_XYP_X_500 29% 40% 0.195 0.8511.36 1.01 2 100100%1
1OD8_XYP_A_1311 100% 64% 0.047 0.9920.75 0.64 - -00100%1
1V0M_XYP_A_1304 100% 71% 0.035 0.9930.82 0.33 - -0090%1
8Y00_XYP_D_201 99% 28% 0.032 0.9860.63 2.19 - 71090%1
2WYS_XYP_A_1001 99% 38% 0.052 0.9830.69 1.7 - 430100%1
4PMY_XYP_A_401 99% 73% 0.051 0.9790.49 0.57 - -00100%1