SPM: SPERMINE
SPM is a Ligand Of Interest in 7NE7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7NE7_SPM_A_902 | 40% | 75% | 0.143 | 0.854 | 0.38 | 0.6 | - | - | 0 | 0 | 100% | 1 |
7NE7_SPM_A_903 | 24% | 93% | 0.18 | 0.809 | 0.12 | 0.34 | - | - | 0 | 0 | 100% | 0.9 |
7NE7_SPM_A_901 | 12% | 90% | 0.19 | 0.716 | 0.22 | 0.39 | - | - | 0 | 0 | 100% | 0.8 |
7NE7_SPM_A_907 | 4% | 96% | 0.28 | 0.649 | 0.16 | 0.19 | - | - | 0 | 0 | 100% | 0.7 |
7NE7_SPM_A_908 | 1% | 92% | 0.396 | 0.507 | 0.16 | 0.35 | - | - | 4 | 0 | 100% | 0.6 |
7NE7_SPM_A_906 | 1% | 93% | 0.37 | 0.45 | 0.2 | 0.26 | - | - | 4 | 0 | 100% | 0.8 |
8ONO_SPM_A_703 | 38% | 78% | 0.11 | 0.811 | 0.18 | 0.7 | - | - | 3 | 0 | 100% | 1 |
7YWS_SPM_A_701 | 27% | 68% | 0.133 | 0.776 | 0.35 | 0.88 | - | 1 | 4 | 0 | 100% | 1 |
7OB1_SPM_A_701 | 21% | 89% | 0.178 | 0.785 | 0.2 | 0.44 | - | - | 0 | 0 | 100% | 1 |
6E1X_SPM_C_201 | 93% | 57% | 0.061 | 0.956 | 0.57 | 1.05 | - | - | 2 | 0 | 100% | 1 |
4MJ8_SPM_A_201 | 84% | 64% | 0.098 | 0.96 | 0.41 | 0.97 | - | - | 0 | 0 | 100% | 1 |
4MI4_SPM_A_201 | 84% | 61% | 0.096 | 0.957 | 0.73 | 0.76 | - | - | 0 | 0 | 100% | 1 |
1ICK_SPM_A_21 | 79% | 4% | 0.103 | 0.95 | 2.74 | 2.83 | 1 | 3 | 1 | 0 | 100% | 0.8929 |
3C6M_SPM_B_501 | 75% | 67% | 0.134 | 0.969 | 0.42 | 0.83 | - | - | 1 | 0 | 100% | 1 |