GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 8GJU designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8GJU_GDP_A_501 | 56% | 19% | 0.188 | 0.962 | 1.76 | 1.7 | 5 | 7 | 0 | 0 | 100% | 1 |
| 8GJU_GDP_D_501 | 55% | 19% | 0.191 | 0.961 | 1.69 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
| 8GJU_GDP_F_601 | 52% | 20% | 0.2 | 0.959 | 1.67 | 1.73 | 5 | 8 | 0 | 0 | 100% | 1 |
| 8GJU_GDP_B_501 | 44% | 20% | 0.229 | 0.958 | 1.62 | 1.77 | 4 | 8 | 0 | 0 | 100% | 1 |
| 2WWW_GDP_C_600 | 71% | 46% | 0.144 | 0.966 | 0.96 | 1.12 | - | 2 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
