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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "secB"

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Search Summary

This query matches 359 Structures.

Refinements

Structure Determination Methodology

	computational (351)
	experimental (8)

CSM Source Database

AlphaFoldDB (351)

pLDDT Global Quality Score

	70.0 - 90.0 (189)
	> 90.0 (162)

Scientific Name of Source Organism

	Escherichia coli O157:H7 (7)
	Escherichia coli K-12 (6)
	Escherichia coli 55989 (2)
	Acidiphilium cryptum JF-5 (1)
	Acidithiobacillus ferrooxidans ATCC 23270 (1)
	Acidithiobacillus ferrooxidans ATCC 53993 (1)
	Acidovorax sp. JS42 (1)
	Acinetobacter baumannii AB0057 (1)
	Acinetobacter baumannii AB307-0294 (1)
	Acinetobacter baumannii ACICU (1)

More...

Taxonomy

Bacteria (359)

Experimental Method

	SOLUTION NMR (7)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

Protein (359)

Refinement Resolution (Å)

2.0 - 2.5 (1)

Release Date

	2000 - 2004 (1)
	2015 - 2019 (7)
	2020 - 2024 (351)

Enzyme Classification Name

Hydrolases (5)

Symmetry Type

	Asymmetric (357)
	Cyclic (1)
	Dihedral (1)

SCOP Classification

Alpha and beta proteins (a+b) (8)

AllSelected

1 to 25 of 359 Structures

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1QYN	Download File View File

Crystal Structure of SecB from Escherichia coli

Dekker, C., de Kruijff, B., Gros, P.

(2003) J Struct Biol 144: 313-319

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Escherichia coli
Macromolecule	Protein-export protein secB (protein)

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5JTL	Download File View File

The structure of chaperone SecB in complex with unstructured proPhoA

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Escherichia coli O157:H7
Macromolecule	Alkaline phosphatase (protein) Protein-export protein SecB (protein)

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5JTM	Download File View File

The structure of chaperone SecB in complex with unstructured PhoA binding site a

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli 55989 Escherichia coli K-12
Macromolecule	Alkaline phosphatase (protein) Protein-export protein SecB (protein)

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5JTN	Download File View File

The structure of chaperone SecB in complex with unstructured proPhoA binding site c

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Escherichia coli O157:H7
Macromolecule	Alkaline phosphatase (protein) Protein-export protein SecB (protein)

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5JTO	Download File View File

The structure of chaperone SecB in complex with unstructured proPhoA binding site d

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Escherichia coli O157:H7
Macromolecule	Alkaline phosphatase (protein) Protein-export protein SecB (protein)

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5JTP	Download File View File

The structure of chaperone SecB in complex with unstructured proPhoA binding site e

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli K-12 Escherichia coli O157:H7
Macromolecule	Alkaline phosphatase (protein) Protein-export protein SecB (protein)

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5JTQ	Download File View File

The structure of chaperone SecB in complex with unstructured MBP binding site d

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli O157:H7
Macromolecule	Maltose-binding periplasmic protein (protein) Protein-export protein SecB (protein)

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5JTR	Download File View File

The structure of chaperone SecB in complex with unstructured MBP binding site e

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli O157:H7
Macromolecule	Maltose-binding periplasmic protein (protein) Protein-export protein SecB (protein)

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AF_AFA0A0H3H025F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A0A0H3H025-F1
pLDDT (global)	88.05
Organisms	Klebsiella pneumoniae subsp. pneumoniae HS11286
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA0KAS7F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A0KAS7-F1
pLDDT (global)	91.14
Organisms	Burkholderia cenocepacia HI2424
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA0KF07F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A0KF07-F1
pLDDT (global)	87.93
Organisms	Aeromonas hydrophila subsp. hydrophila ATCC 7966
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA0KR79F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A0KR79-F1
pLDDT (global)	89.86
Organisms	Shewanella sp. ANA-3
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA0LD65F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A0LD65-F1
pLDDT (global)	91.44
Organisms	Magnetococcus marinus MC-1
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1AHE6F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1AHE6-F1
pLDDT (global)	89.24
Organisms	Escherichia coli APEC O1
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1B5S4F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1B5S4-F1
pLDDT (global)	89.18
Organisms	Paracoccus denitrificans PD1222
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1JHY4F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1JHY4-F1
pLDDT (global)	88.6
Organisms	Yersinia enterocolitica subsp. enterocolitica 8081
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1K9C3F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1K9C3-F1
pLDDT (global)	92.53
Organisms	Azoarcus olearius
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1KSA7F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1KSA7-F1
pLDDT (global)	94.66
Organisms	Neisseria meningitidis FAM18
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1RQ93F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1RQ93-F1
pLDDT (global)	90.46
Organisms	Shewanella sp. W3-18-1
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1S1L8F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1S1L8-F1
pLDDT (global)	90.24
Organisms	Shewanella amazonensis SB2B
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1SZI0F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1SZI0-F1
pLDDT (global)	87.62
Organisms	Psychromonas ingrahamii 37
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1TTW2F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1TTW2-F1
pLDDT (global)	94.08
Organisms	Paracidovorax citrulli AAC00-1
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1U5G9F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1U5G9-F1
pLDDT (global)	90.53
Organisms	Marinobacter nauticus VT8
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1UU92F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1UU92-F1
pLDDT (global)	90
Organisms	Bartonella bacilliformis KC583
Macromolecule	Protein-export protein SecB (protein)

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AF_AFA1UZX6F1	Download File

Computed structure model of Protein-export protein SecB

AlphaFold DB	AF-A1UZX6-F1
pLDDT (global)	92.26
Organisms	Burkholderia mallei SAVP1
Macromolecule	Protein-export protein SecB (protein)

1 to 25 of 359 Structures

Page 1 of 15

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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Structure Determination Methodology

CSM Source Database

pLDDT Global Quality Score

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification