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4MF7	Download File View File

Crystal structure of glutathione transferase BBTA-3750 from Bradyrhizobium sp., Target EFI-507290

Patskovsky, Y., Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)

To be published

Released	2013-09-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	glutathione S-transferase enzyme with thioredoxin-like domain (protein)

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4N8Y	Download File View File

Crystal structure of a trap periplasmic solute binding protein from bradyrhizobium sp. btai1 b (bbta_0128), target EFI-510056 (bbta_0128), complex with alpha/beta-d-galacturonate

Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

(2015) Biochemistry 54: 909-931

Released	2013-11-20
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) (protein)
Unique Ligands	ADA, GTR

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4NHZ	Download File View File

Crystal structure of glutathione transferase BBTA-3750 from Bradyrhizobium sp., Target EFI-507290, with one glutathione bound

To be published

Released	2013-11-20
Method	X-RAY DIFFRACTION 1.901 Å
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Putative glutathione S-transferase enzyme with thioredoxin-like domain (protein)
Unique Ligands	GSH

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4YHS	Download File View File

CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM BRADYRHIZOBIUM sp. BTAi1 (BBta_2440, TARGET EFI-511490) WITH BOUND BIS-TRIS

Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Koss, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

To be published

Released	2015-03-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Monosaccharide ABC transporter substrate-binding protein, CUT2 family (protein)
Unique Ligands	BTB, CL

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AF_AFA5E812F1	Download File

Computed structure model of Chromosomal replication initiator protein DnaA

AlphaFold DB	AF-A5E812-F1
pLDDT (global)	83.71
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Chromosomal replication initiator protein DnaA (protein)

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AF_AFA5E855F1	Download File

Computed structure model of tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase

AlphaFold DB	AF-A5E855-F1
pLDDT (global)	93.22
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (protein)

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AF_AFA5E857F1	Download File

Computed structure model of Endoribonuclease YbeY

AlphaFold DB	AF-A5E857-F1
pLDDT (global)	91.49
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Endoribonuclease YbeY (protein)

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AF_AFA5E863F1	Download File

Computed structure model of Ribosome maturation factor RimP

AlphaFold DB	AF-A5E863-F1
pLDDT (global)	84.55
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Ribosome maturation factor RimP (protein)

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AF_AFA5E866F1	Download File

Computed structure model of Translation initiation factor IF-2

AlphaFold DB	AF-A5E866-F1
pLDDT (global)	75.36
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Translation initiation factor IF-2 (protein)

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AF_AFA5E867F1	Download File

Computed structure model of Ribosome-binding factor A

AlphaFold DB	AF-A5E867-F1
pLDDT (global)	87.58
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Ribosome-binding factor A (protein)

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AF_AFA5E869F1	Download File

Computed structure model of 30S ribosomal protein S15

AlphaFold DB	AF-A5E869-F1
pLDDT (global)	95.5
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	30S ribosomal protein S15 (protein)

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AF_AFA5E870F1	Download File

Computed structure model of Polyribonucleotide nucleotidyltransferase

AlphaFold DB	AF-A5E870-F1
pLDDT (global)	91.91
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Polyribonucleotide nucleotidyltransferase (protein)

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AF_AFA5E877F1	Download File

Computed structure model of 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase

AlphaFold DB	AF-A5E877-F1
pLDDT (global)	95.85
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (protein)

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AF_AFA5E887F1	Download File

Computed structure model of Formamidopyrimidine-DNA glycosylase

AlphaFold DB	AF-A5E887-F1
pLDDT (global)	90.22
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein)

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AF_AFA5E888F1	Download File

Computed structure model of Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE

AlphaFold DB	AF-A5E888-F1
pLDDT (global)	89.93
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (protein)

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AF_AFA5E891F1	Download File

Computed structure model of Deoxyuridine 5'-triphosphate nucleotidohydrolase

AlphaFold DB	AF-A5E891-F1
pLDDT (global)	96.11
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)

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AF_AFA5E8A2F1	Download File

Computed structure model of Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

AlphaFold DB	AF-A5E8A2-F1
pLDDT (global)	88.48
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (protein)

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AF_AFA5E8A4F1	Download File

Computed structure model of Tryptophan synthase beta chain

AlphaFold DB	AF-A5E8A4-F1
pLDDT (global)	95.74
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Tryptophan synthase beta chain (protein)

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AF_AFA5E8A5F1	Download File

Computed structure model of N-(5'-phosphoribosyl)anthranilate isomerase

AlphaFold DB	AF-A5E8A5-F1
pLDDT (global)	94.52
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	N-(5'-phosphoribosyl)anthranilate isomerase (protein)

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AF_AFA5E8A7F1	Download File

Computed structure model of Integration host factor subunit beta

AlphaFold DB	AF-A5E8A7-F1
pLDDT (global)	93.06
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Integration host factor subunit beta (protein)

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AF_AFA5E8B1F1	Download File

Computed structure model of 3-phosphoshikimate 1-carboxyvinyltransferase

AlphaFold DB	AF-A5E8B1-F1
pLDDT (global)	96.18
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	3-phosphoshikimate 1-carboxyvinyltransferase (protein)

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AF_AFA5E8E3F1	Download File

Computed structure model of Pantothenate kinase

AlphaFold DB	AF-A5E8E3-F1
pLDDT (global)	91.09
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Pantothenate kinase (protein)

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AF_AFA5E8E5F1	Download File

Computed structure model of Imidazole glycerol phosphate synthase subunit HisF

AlphaFold DB	AF-A5E8E5-F1
pLDDT (global)	93.35
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	Imidazole glycerol phosphate synthase subunit HisF (protein)

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AF_AFA5E8E8F1	Download File

Computed structure model of 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase

AlphaFold DB	AF-A5E8E8-F1
pLDDT (global)	94.22
Organisms	Bradyrhizobium sp. BTAi1
Macromolecule	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (protein)