RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Source Organism Taxonomy Name (Full Lineage) = "Pseudomonas paraeruginosa PA7"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 535 Structures.

Refinements

Structure Determination Methodology

	computational (512)
	experimental (23)

CSM Source Database

AlphaFoldDB (512)

pLDDT Global Quality Score

	50.0 - 70.0 (3)
	70.0 - 90.0 (111)
	> 90.0 (398)

Scientific Name of Source Organism

Pseudomonas paraeruginosa PA7 (535)

Taxonomy

Bacteria (535)

Experimental Method

X-RAY DIFFRACTION (23)

Polymer Entity Type

Protein (535)

Refinement Resolution (Å)

	1.5 - 2.0 (9)
	2.0 - 2.5 (9)
	2.5 - 3.0 (4)
	3.0 - 3.5 (1)

Release Date

	2015 - 2019 (7)
	2020 - 2024 (528)

Enzyme Classification Name

	Transferases (160)
	Hydrolases (62)
	Lyases (40)
	Oxidoreductases (32)
	Ligases (33)
	Isomerases (19)
	Translocases (18)

Symmetry Type

	Asymmetric (512)
	Cyclic (21)
	Dihedral (1)

SCOP Classification

All beta proteins (7)

AllSelected

1 to 25 of 535 Structures

Page 1 of 22

Sort by

Explore in 3D

4UT5	Download File View File

Crystal structure of the LecB lectin from Pseudomonas aeruginosa strain PA7 in complex with lewis a tetrasaccharide

Boukerb, A.M., Decor, A., Tabaroni, R., Varrot, A., Debentzmann, S., Vidal, S., Imberty, A., Cournoyer, B.

(2016) Front Microbiol 7: 811

Released	2015-07-22
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	LECB LECTIN (protein)
Unique Ligands	CA, GAL
Unique branched monosaccharides	FUC, GAL, GLA, NAG

Explore in 3D

5DEM	Download File View File

Structure of Pseudomonas aeruginosa LpxA

Smith, E.W., Chen, Y.

(2015) Biochemistry 54: 5937-5948

Released	2015-09-16
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	PO4

Explore in 3D

5DEP	Download File View File

Structure of Pseudomonas aeruginosa LpxA in complex with UDP-GlcNAc

Smith, E.W., Chen, Y.

(2015) Biochemistry 54: 5937-5948

Released	2015-09-16
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	PO4, UD1

Explore in 3D

5DG3	Download File View File

Structure of Pseudomonas aeruginosa LpxA in complex with UDP-3-O-(R-3-hydroxydecanoyl)-GlcNAc

Smith, E.W., Chen, Y.

(2015) Biochemistry 54: 5937-5948

Released	2015-09-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	PO4, U21

Explore in 3D

5I21	Download File View File

Y55W Hfq from Pseudomonas aeruginosa

Nikulin, A.D., Lekontseva, N.V.

To be published

Released	2016-03-16
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	RNA-binding protein Hfq (protein)
Unique Ligands	CL

Explore in 3D

6UEE	Download File View File

Pseudomonas aeruginosa LpxA Complex Structure with Ligand

Chen, Y., Kroeck, K., Sacco, M.

(2019) Sci Rep 9: 15450-15450

Released	2019-11-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	GOL, Q5M

Explore in 3D

6UEG	Download File View File

Pseudomonas aeruginosa LpxA Complex Structure with Ligand

Chen, Y., Kroeck, K., Sacco, M.

(2019) Sci Rep 9: 15450-15450

Released	2019-11-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	CA, Q5G

Explore in 3D

6XYJ	Download File View File

Hfq from E.coli with inserted long loop L4 sequence

Nikulin, A.D., Alipov, A.A., Lekontseva, N.V.

(2021) Crystallogr Rep 66: 791-796

Released	2021-02-10
Method	X-RAY DIFFRACTION 2.772 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	RNA-binding protein Hfq (protein)

Explore in 3D

7OJ6	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 1

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	ACT, CL, VFE

Explore in 3D

7OJP	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 1

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	MG, VFE

Explore in 3D

7OJQ	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 7

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	VJE

Explore in 3D

7OJW	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 93

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	VFW

Explore in 3D

7OJY	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 6

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	CL, VGQ

Explore in 3D

7OK1	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 3

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	CL, VFN

Explore in 3D

7OK2	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 3

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	SO4, VFN

Explore in 3D

7OKA	Download File View File

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 14

Ryan, M.D., Parkes, A.L., Southey, M., Andersen, O.A., Zahn, M., Barker, J., DeJonge, B.L.M.

(2021) J Med Chem 64: 14377-14425

Released	2021-10-13
Method	X-RAY DIFFRACTION 2.74 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	CL, SO4, VFT

Explore in 3D

7T5R	Download File View File

P. aeruginosa LpxA in complex with ligand H7

Sacco, M., Chen, Y.

(2022) ACS Infect Dis 8: 1231-1240

Released	2022-07-06
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	F30, GOL

Explore in 3D

7T5S	Download File View File

P. aeruginosa LpxA in complex with ligand H16

Sacco, M., Chen, Y.

(2022) ACS Infect Dis 8: 1231-1240

Released	2022-07-06
Method	X-RAY DIFFRACTION 3 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	F3R

Explore in 3D

7T5X	Download File View File

P. aeruginosa LpxA in complex with ligand L6

Sacco, M., Chen, Y.

(2022) ACS Infect Dis 8: 1231-1240

Released	2022-07-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	F4L

Explore in 3D

7T5Z	Download File View File

P. aeruginosa LpxA in complex with ligand L8

Sacco, M., Chen, Y.

(2022) ACS Infect Dis 8: 1231-1240

Released	2022-07-06
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	F6I, PEG

Explore in 3D

7T60	Download File View File

P. aeruginosa LpxA in complex with ligand L13

Sacco, M., Chen, Y.

(2022) ACS Infect Dis 8: 1231-1240

Released	2022-07-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	F9H, GOL, TRS

Explore in 3D

7T61	Download File View File

P. aeruginosa LpxA in complex with ligand L15

Sacco, M., Chen, Y.

(2022) ACS Infect Dis 8: 1231-1240

Released	2022-07-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas paraeruginosa PA7
Macromolecule	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (protein)
Unique Ligands	ACT, FCU, GOL