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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Al Obaidi, N."

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Search Summary

This query matches 193 Structures.

Refinements

Structure Determination Methodology

experimental (193)

Scientific Name of Source Organism

	Panus similis (56)
	Thermoascus aurantiacus (17)
	Opitutus terrae PB90-1 (9)
	Aspergillus oryzae RIB40 (8)
	Lactococcus lactis (7)
	Lactococcus phage TP901-1 (7)
	Bacillus licheniformis (6)
	Achaetomiella virescens (5)
	Arabidopsis thaliana (5)
	Aspergillus aculeatus (5)

More...

Taxonomy

	Eukaryota (113)
	Bacteria (70)
	Duplodnaviria (7)
	Archaea (3)

Experimental Method

	X-RAY DIFFRACTION (192)
	NEUTRON DIFFRACTION (1)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (193)
	DNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (43)
	1.5 - 2.0 (73)
	2.0 - 2.5 (45)
	2.5 - 3.0 (27)
	3.0 - 3.5 (3)
	4.0 - 4.5 (2)

Release Date

	2000 - 2004 (24)
	2005 - 2009 (13)
	2010 - 2014 (20)
	2015 - 2019 (54)
	2020 - 2024 (80)
	2025 - 2029 (2)

Enzyme Classification Name

	Oxidoreductases (79)
	Hydrolases (66)
	Lyases (5)
	Transferases (3)

Symmetry Type

	Asymmetric (157)
	Cyclic (26)
	Dihedral (10)

SCOP Classification

	All beta proteins (21)
	Alpha and beta proteins (a/b) (36)
	Artifacts (8)
	All alpha proteins (2)

AllSelected

1 to 25 of 193 Structures

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1E5N \| pdb_00001e5n	Download File View File

E246C mutant of P fluorescens subsp. cellulosa xylanase A in complex with xylopentaose

Lo Leggio, L., Jenkins, J.A., Harris, G.W., Pickersgill, R.W.

(2000) Proteins 41: 362-373

Released	2000-12-08
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Pseudomonas fluorescens
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)
Unique Ligands	CA
Unique branched monosaccharides	XYP

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1GOK \| pdb_00001gok	Download File View File

Thermostable xylanase I from Thermoascus aurantiacus- Crystal form II

Lo Leggio, L., Pickersgill, R.W.

(2001) FEBS Lett 509: 303

Released	2001-10-25
Method	X-RAY DIFFRACTION 1.14 Å
Organisms	Thermoascus aurantiacus
Macromolecule	ENDO-1,4-BETA-XYLANASE (protein)

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1GOM \| pdb_00001gom	Download File View File

Thermostable xylanase I from Thermoascus aurantiacus- Crystal form I

Lo Leggio, L., Pickersgill, R.W.

(2001) FEBS Lett 509: 303

Released	2001-11-15
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Thermoascus aurantiacus
Macromolecule	ENDO-1,4-BETA-XYLANASE (protein)

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1GOO \| pdb_00001goo	Download File View File

Thermostable xylanase I from Thermoascus aurantiacus - Cryocooled glycerol complex

Eckert, K., Andrei, C., Larsen, S., Lo Leggio, L.

(2001) FEBS Lett 509: 303

Released	2001-12-03
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Thermoascus aurantiacus
Macromolecule	ENDO-1,4-BETA-XYLANASE (protein)
Unique Ligands	GOL

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1GOQ \| pdb_00001goq	Download File View File

Thermostable xylanase I from Thermoascus aurantiacus - Room temperature xylobiose complex

Lo Leggio, L., Larsen, S.

(2001) FEBS Lett 509: 303

Released	2001-12-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermoascus aurantiacus
Macromolecule	ENDO-1,4-BETA-XYLANASE (protein)
Unique Ligands	XYP
Unique branched monosaccharides	XYP

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1GOR \| pdb_00001gor	Download File View File

THERMOSTABLE XYLANASE I FROM THERMOASCUS AURANTIACUS - XYLOBIOSE COMPLEX AT 100 K

Lo Leggio, L., Larsen, S.

(2001) FEBS Lett 509: 303

Released	2001-12-07
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermoascus aurantiacus
Macromolecule	ENDO-1,4-BETA-XYLANASE (protein)
Unique branched monosaccharides	XYP, XYS

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1GZJ \| pdb_00001gzj	Download File View File

Structure of Thermoascus aurantiacus family 5 endoglucanase

Lo Leggio, L., Pickersgill, R.W., Larsen, S.

(2002) FEBS Lett 523: 103-108

Released	2002-08-06
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Thermoascus aurantiacus
Macromolecule	EGI (protein)

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1HJQ \| pdb_00001hjq	Download File View File

Structure of two fungal beta-1,4-galactanases: searching for the basis for temperature and pH optimum.

Le Nours, J., Ryttersgaard, C., Lo Leggio, L., Ostergaard, P.R., Borchert, T.V., Christensen, L.L.H., Larsen, S.

(2003) Protein Sci 12: 1195

Released	2003-07-25
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Mycothermus thermophilus
Macromolecule	BETA-1,4-GALACTANASE (protein)
Unique Ligands	NAG

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1HJS \| pdb_00001hjs	Download File View File

Structure of two fungal beta-1,4-galactanases: searching for the basis for temperature and pH optimum.

Le Nours, J., Ryttersgaard, C., Lo Leggio, L., Ostergaard, P.R., Borchert, T.V., Christensen, L.L.H., Larsen, S.

(2003) Protein Sci 12: 1195

Released	2003-06-02
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Thermothelomyces thermophilus
Macromolecule	BETA-1,4-GALACTANASE (protein)
Unique Ligands	EPE, NAG, PEG, SO4

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1HJU \| pdb_00001hju	Download File View File

Structure of two fungal beta-1,4-galactanases: searching for the basis for temperature and pH optimum.

Le Nours, J., Ryttersgaard, C., Lo Leggio, L., Ostergaard, P.R., Borchert, T.V., Christensen, L.L.H., Larsen, S.

(2003) Protein Sci 12: 1195

Released	2003-06-02
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Thermothelomyces thermophilus
Macromolecule	BETA-1,4-GALACTANASE (protein)
Unique Ligands	NAG, PEG, SO4, TRS

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1JQV \| pdb_00001jqv	Download File View File

The K213E mutant of Lactococcus lactis Dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lactococcus lactis
Macromolecule	Dihydroorotate dehydrogenase A (protein)
Unique Ligands	ACY, FMN, MG, ORO

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1JQX \| pdb_00001jqx	Download File View File

The R57A mutant of Lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, GOL, MG, ORO

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1JRB \| pdb_00001jrb	Download File View File

The P56A mutant of Lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, ORO

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1JRC \| pdb_00001jrc	Download File View File

The N67A mutant of Lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, ORO

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1JUB \| pdb_00001jub	Download File View File

The K136E mutant of lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, GOL, MG

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1JUE \| pdb_00001jue	Download File View File

1.8 A resolution structure of native lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	ACY, FMN, GOL, MG

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1K6A \| pdb_00001k6a	Download File View File

Structural studies on the mobility in the active site of the Thermoascus aurantiacus xylanase I

Lo Leggio, L., Kalogiannis, S., Eckert, K., Teixeira, S.C.M., Bhat, M.K., Andrei, C., Pickersgill, R.W., Larsen, S.

(2001) FEBS Lett 509: 303-308

Released	2002-07-03
Method	X-RAY DIFFRACTION 1.14 Å
Organisms	Thermoascus aurantiacus
Macromolecule	xylanase I (protein)

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1OCX \| pdb_00001ocx	Download File View File

E. coli maltose-O-acetyltransferase

Lo Leggio, L., Dal Degan, F., Poulsen, P., Larsen, S.

(2003) Biochemistry 42: 5225

Released	2003-06-12
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Escherichia coli
Macromolecule	MALTOSE O-ACETYLTRANSFERASE (protein)
Unique Ligands	PBM

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1OVD \| pdb_00001ovd	Download File View File

THE K136E MUTANT OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE A IN COMPLEX WITH OROTATE

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-08-19
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Lactococcus lactis
Macromolecule	DIHYDROOROTATE DEHYDROGENASE A (protein)
Unique Ligands	FMN, GOL, MG, ORO

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1R8L \| pdb_00001r8l	Download File View File

The structure of endo-beta-1,4-galactanase from Bacillus licheniformis

Ryttersgaard, C., Le Nours, J., Lo Leggio, L., Jorgensen, C.T., Christensen, L.L., Bjornvad, M., Larsen, S.

(2004) J Mol Biology 341: 107-117

Released	2004-11-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bacillus licheniformis
Macromolecule	endo-beta-1,4-galactanase (protein)
Unique Ligands	CA

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1UR0 \| pdb_00001ur0	Download File View File

The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products.

Ryttersgaard, C., Le Nours, J., Lo Leggio, L., Jorgensen, C.T., Christensen, L.L.H., Bjornvad, M., Larsen, S.

(2004) J Mol Biology 341: 107

Released	2004-10-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacillus licheniformis
Macromolecule	GALACTANASE (protein)
Unique Ligands	CA, PGE
Unique branched monosaccharides	GAL

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1UR4 \| pdb_00001ur4	Download File View File

The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products.

Ryttersgaard, C., Le Nours, J., Lo Leggio, L., Jorgensen, C.T., Christensen, L.L.H., Bjornvad, M., Larsen, S.

(2004) J Mol Biology 341: 107

Released	2004-10-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus licheniformis
Macromolecule	GALACTANASE (protein)
Unique Ligands	CA, PEG, PGE
Unique branched monosaccharides	GAL

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1UT4 \| pdb_00001ut4	Download File View File

Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors

Ernst, H.A., Olsen, A.N., Skriver, K., Larsen, S., Lo Leggio, L.

(2004) EMBO Rep 5: 297

Released	2004-03-19
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Arabidopsis thaliana
Macromolecule	NO APICAL MERISTEM PROTEIN (protein)

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1UT7 \| pdb_00001ut7	Download File View File

Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors

Ernst, H.A., Olsen, A.N., Skriver, K., Larsen, S., Lo Leggio, L.

(2004) EMBO Rep 5: 297

Released	2004-03-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Arabidopsis thaliana
Macromolecule	NO APICAL MERISTEM PROTEIN (protein)
Unique Ligands	AU

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2BVT \| pdb_00002bvt	Download File View File

The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases.

Le Nours, J., Anderson, L., Stoll, D., Stalbrand, H., Lo Leggio, L.

(2005) Biochemistry 44: 12700

Released	2005-09-26
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Cellulomonas fimi
Macromolecule	BETA-1,4-MANNANASE (protein)
Unique Ligands	CAC
Unique branched monosaccharides	BMA

1 to 25 of 193 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1E5N | pdb_00001e5n

1GOK | pdb_00001gok

1GOM | pdb_00001gom

1GOO | pdb_00001goo

1GOQ | pdb_00001goq

1GOR | pdb_00001gor

1GZJ | pdb_00001gzj

1HJQ | pdb_00001hjq

1HJS | pdb_00001hjs

1HJU | pdb_00001hju

1JQV | pdb_00001jqv

1JQX | pdb_00001jqx

1JRB | pdb_00001jrb

1JRC | pdb_00001jrc

1JUB | pdb_00001jub

1JUE | pdb_00001jue

1K6A | pdb_00001k6a

1OCX | pdb_00001ocx

1OVD | pdb_00001ovd

1R8L | pdb_00001r8l

1UR0 | pdb_00001ur0

1UR4 | pdb_00001ur4

1UT4 | pdb_00001ut4

1UT7 | pdb_00001ut7

2BVT | pdb_00002bvt