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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Dimastrogiovanni, D."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Schistosoma mansoni (11)
	Escherichia coli K-12 (1)
	Plasmodium falciparum (1)
	Salmonella enterica subsp. enterica serovar Typhimurium (1)

Taxonomy

	Eukaryota (12)
	Bacteria (1)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

	Protein (13)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (6)
	2.0 - 2.5 (2)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)

Release Date

	2005 - 2009 (4)
	2010 - 2014 (8)
	2015 - 2019 (1)

Enzyme Classification Name

Oxidoreductases (12)

Symmetry Type

	Cyclic (9)
	Asymmetric (5)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	Artifacts (1)

AllSelected

1 to 13 of 13 Structures

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2V1M \| pdb_00002v1m	Download File View File

Crystal structure of Schistosoma mansoni glutathione peroxidase

Dimastrogiovanni, D., Miele, A.E., Angelucci, F., Boumis, G., Bellelli, A., Brunori, M.

(2010) Proteins 78: 259

Released	2009-09-08
Method	X-RAY DIFFRACTION 1 Å
Organisms	Schistosoma mansoni
Macromolecule	GLUTATHIONE PEROXIDASE (protein)
Unique Ligands	ACT, LI, SO4

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2V6O \| pdb_00002v6o	Download File View File

Structure of Schistosoma mansoni Thioredoxin-Glutathione Reductase (SmTGR)

Miele, A.E., Angelucci, F., Boumis, G., Dimastrogiovanni, D., Bellelli, A., Brunori, M.

(2008) Proteins 72: 936

Released	2008-03-04
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN GLUTATHIONE REDUCTASE (protein)
Unique Ligands	FAD, NO3, PG4

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2WGR \| pdb_00002wgr	Download File View File

Combining crystallography and molecular dynamics: The case of Schistosoma mansoni phospholipid glutathione peroxidase

Dimastrogiovanni, D., Anselmi, M., Miele, A.E., Boumis, G., Angelucci, F., Di Nola, A., Brunori, M., Bellelli, A.

(2010) Proteins 78: 259

Released	2009-09-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Schistosoma mansoni
Macromolecule	GLUTATHIONE PEROXIDASE (protein)
Unique Ligands	POP

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2X8C \| pdb_00002x8c	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni with the reduced C-terminal end

Angelucci, F., Dimastrogiovanni, D., Boumis, G., Brunori, M., Miele, A.E., Saccoccia, F., Bellelli, A.

(2010) J Biological Chem 285: 32557

Released	2010-07-21
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN GLUTATHIONE REDUCTASE (protein)
Unique Ligands	FAD, PEG, PGE

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2X8G \| pdb_00002x8g	Download File View File

Oxidized thioredoxin glutathione reductase from Schistosoma mansoni

Angelucci, F., Dimastrogiovanni, D., Boumis, G., Brunori, M., Miele, A.E., Saccoccia, F., Bellelli, A.

(2010) J Biological Chem 285: 32557

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN GLUTATHIONE REDUCTASE (protein)
Unique Ligands	FAD, GOL, PEG, PG4

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2X8H \| pdb_00002x8h	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with GSH

Angelucci, F., Dimastrogiovanni, D., Boumis, G., Brunori, M., Miele, A.E., Saccoccia, F., Bellelli, A.

(2010) J Biological Chem 285: 32557

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN GLUTATHIONE REDUCTASE (protein)
Unique Ligands	BME, CA, FAD, GSH, PEG, PG4, PGE

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2X99 \| pdb_00002x99	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with NADPH

Angelucci, F., Dimastrogiovanni, D., Boumis, G., Brunori, M., Miele, A.E., Saccoccia, F., Bellelli, A.

(2010) J Biological Chem 285: 32557

Released	2010-07-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN GLUTATHIONE REDUCTASE (protein)
Unique Ligands	CA, FAD, GSH, NDP, PEG, PG4

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2XBI \| pdb_00002xbi	Download File View File

Crystal structure of Schistosoma mansoni Thioredoxin at 1.6 Angstrom

Boumis, G., Miele, A.E., Dimastrogiovanni, D., Angelucci, F., Bellelli, A.

(2011) Protein Sci 20: 1069

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN (protein)
Unique Ligands	GOL

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2XBQ \| pdb_00002xbq	Download File View File

Crystal structure of reduced Schistosoma mansoni Thioredoxin pre- protein at 1.7 Angstrom

Boumis, G., Miele, A.E., Dimastrogiovanni, D., Angelucci, F., Bellelli, A.

(2011) Protein Sci 20: 1069

Released	2010-07-21
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXIN (protein)
Unique Ligands	ZN

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2XC2 \| pdb_00002xc2	Download File View File

Crystal structure of oxidized Schistosoma mansoni Thioredoxin pre- protein at 1.6 Angstrom

Boumis, G., Miele, A.E., Dimastrogiovanni, D., Angelucci, F., Bellelli, A.

(2011) Protein Sci 20: 1069

Released	2010-08-11
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Schistosoma mansoni
Macromolecule	THIOREDOXINN (protein)
Unique Ligands	CA, ZN

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3H4K \| pdb_00003h4k	Download File View File

Crystal structure of the wild type Thioredoxin glutatione reductase from Schistosoma mansoni in complex with auranofin

Angelucci, F., Dimastrogiovanni, D., Miele, A.E., Boumis, G., Brunori, M., Bellelli, A.

(2009) J Biological Chem 284: 28977-28985

Released	2009-08-25
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	AU, FAD, GSH, K, PG4

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4B1B \| pdb_00004b1b	Download File View File

Crystal structure of Plasmodium falciparum oxidised Thioredoxin Reductase at 2.9 angstrom

Boumis, G., Giardina, G., Dimastrogiovanni, D., Angelucci, F., Saccoccia, F., Brunori, M., Bellelli, A., Miele, A.E.

(2012) Biochem Biophys Res Commun 425: 806

Released	2012-08-29
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Plasmodium falciparum
Macromolecule	THIOREDOXIN REDUCTASE (protein)
Unique Ligands	FAD

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4V2S \| pdb_00004v2s	Download File View File

Crystal structure of Hfq in complex with the sRNA RydC

Dimastrogiovanni, D., Frohlich, K.S., Bruce, H.A., Bandyra, K.J., Hohensee, S., Vogel, J., Luisi, B.F.

(2014) Elife 3:

Released	2015-01-14
Method	X-RAY DIFFRACTION 3.48 Å
Organisms	Escherichia coli K-12 Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	RNA-BINDING PROTEIN HFQ (protein) RYDC (nucleic acid)

1 to 13 of 13 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2V1M | pdb_00002v1m

Crystal structure of Schistosoma mansoni glutathione peroxidase

2V6O | pdb_00002v6o

Structure of Schistosoma mansoni Thioredoxin-Glutathione Reductase (SmTGR)

2WGR | pdb_00002wgr

Combining crystallography and molecular dynamics: The case of Schistosoma mansoni phospholipid glutathione peroxidase

2X8C | pdb_00002x8c

Thioredoxin glutathione reductase from Schistosoma mansoni with the reduced C-terminal end

2X8G | pdb_00002x8g

Oxidized thioredoxin glutathione reductase from Schistosoma mansoni

2X8H | pdb_00002x8h

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with GSH

2X99 | pdb_00002x99

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with NADPH

2XBI | pdb_00002xbi

Crystal structure of Schistosoma mansoni Thioredoxin at 1.6 Angstrom

2XBQ | pdb_00002xbq

Crystal structure of reduced Schistosoma mansoni Thioredoxin pre- protein at 1.7 Angstrom

2XC2 | pdb_00002xc2

Crystal structure of oxidized Schistosoma mansoni Thioredoxin pre- protein at 1.6 Angstrom

3H4K | pdb_00003h4k

Crystal structure of the wild type Thioredoxin glutatione reductase from Schistosoma mansoni in complex with auranofin

4B1B | pdb_00004b1b

Crystal structure of Plasmodium falciparum oxidised Thioredoxin Reductase at 2.9 angstrom

4V2S | pdb_00004v2s

Crystal structure of Hfq in complex with the sRNA RydC

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2V1M | pdb_00002v1m

2V6O | pdb_00002v6o

2WGR | pdb_00002wgr

2X8C | pdb_00002x8c

2X8G | pdb_00002x8g

2X8H | pdb_00002x8h

2X99 | pdb_00002x99

2XBI | pdb_00002xbi

2XBQ | pdb_00002xbq

2XC2 | pdb_00002xc2

3H4K | pdb_00003h4k

4B1B | pdb_00004b1b

4V2S | pdb_00004v2s