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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Hackett, J."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Cellvibrio mixtus (6)
	Acetivibrio thermocellus (1)
	Cellvibrio japonicus (1)
	Saccharophagus degradans (1)
	Saccharophagus degradans 2-40 (1)

Taxonomy

Bacteria (10)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (5)
	2.0 - 2.5 (1)
	2.5 - 3.0 (1)

Release Date

	2000 - 2004 (7)
	2005 - 2009 (3)

Enzyme Classification Name

	Hydrolases (1)
	Transferases (1)

Symmetry Type

Asymmetric (10)

SCOP Classification

All beta proteins (9)

AllSelected

1 to 10 of 10 Structures

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1UXX \| pdb_00001uxx	Download File View File

CBM6ct from Clostridium thermocellum in complex with xylopentaose

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Henrissat, D.B.B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Acetivibrio thermocellus
Macromolecule	XYLANASE U (protein)
Unique Ligands	CA
Unique branched monosaccharides	XYP

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1UXZ \| pdb_00001uxz	Download File View File

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Bolam, D., Henrissat, B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Cellvibrio mixtus
Macromolecule	CELLULASE B (protein)

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1UY0 \| pdb_00001uy0	Download File View File

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with glc-1,3-glc-1,4-glc-1,3-glc

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Bolam, D., Henrissat, B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Cellvibrio mixtus
Macromolecule	CELLULASE B (protein)
Unique Ligands	CA, CL, GOL, NA
Unique branched monosaccharides	BGC

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1UYX \| pdb_00001uyx	Download File View File

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with cellobiose

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Bolam, D., Henrissat, B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Cellvibrio mixtus
Macromolecule	CELLULASE B (protein)
Unique Ligands	CA
Unique branched monosaccharides	BGC

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1UYY \| pdb_00001uyy	Download File View File

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with cellotriose

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Bolam, D., Henrissat, B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Cellvibrio mixtus
Macromolecule	CELLULASE B (protein)
Unique Ligands	CA
Unique branched monosaccharides	BGC

Explore in 3D

1UYZ \| pdb_00001uyz	Download File View File

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with xylotetraose

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Bolam, D., Henrissat, B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Cellvibrio mixtus
Macromolecule	CELLULASE B (protein)
Unique Ligands	CA, GOL, NA
Unique branched monosaccharides	XYP

Explore in 3D

1UZ0 \| pdb_00001uz0	Download File View File

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with Glc-4Glc-3Glc-4Glc

Czjzek, M., Pires, V.M.R., Henshaw, J., Prates, J.A.M., Bolam, D., Henrissat, B., Gilbert, H.J.

(2004) J Biological Chem 279: 21560

Released	2004-03-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cellvibrio mixtus
Macromolecule	CELLULASE B (protein)
Unique Ligands	CA, CL, GOL
Unique branched monosaccharides	BGC

Explore in 3D

2CDO \| pdb_00002cdo	Download File View File

structure of agarase carbohydrate binding module in complex with neoagarohexaose

Henshaw, J., Horne, A., Van Bueren, A.L., Money, V.A., Bolam, D.N., Czjzek, M., Weiner, R.M., Hutcheson, S.W., Davies, G.J., Boraston, A.B., Gilbert, H.J.

(2006) J Biological Chem 281: 17099

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Saccharophagus degradans
Macromolecule	BETA-AGARASE 1 (protein)
Unique Ligands	CA, CL, EDO
Unique branched monosaccharides	AAL, GAL

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2CDP \| pdb_00002cdp	Download File View File

Structure of a CBM6 in complex with neoagarohexaose

Henshaw, J., Horne, A., Van Bueren, A.L., Money, V.A., Bolam, D.N., Czjzek, M., Weiner, R.M., Hutcheson, S.W., Davies, G.J., Boraston, A.B., Gilbert, H.J.

(2006) J Biological Chem 281: 17099

Released	2006-02-08
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Saccharophagus degradans 2-40
Macromolecule	BETA-AGARASE 1 (protein)
Unique Ligands	CA, CL, EDO
Unique branched monosaccharides	AAL, GAL

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2VA0 \| pdb_00002va0	Download File View File

Differential regulation of the xylan degrading apparatus of Cellvibrio japonicus by a novel two component system

Murray, J.W., Emami, K., Topakas, E., Nagy, T., Henshaw, J., Jackson, K.A., Nelson, K.E., Mongodin, E.F., Lewis, R.J., Gilbert, H.J.

(2009) J Biological Chem 284: 1086

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.602 Å
Organisms	Cellvibrio japonicus
Macromolecule	ABFS ARABINOFURANOSIDASE TWO COMPONENT SYSTEM SENSOR PROTEIN (protein)
Unique Ligands	CL, PO4

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1UXX | pdb_00001uxx

CBM6ct from Clostridium thermocellum in complex with xylopentaose

1UXZ | pdb_00001uxz

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A

1UY0 | pdb_00001uy0

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with glc-1,3-glc-1,4-glc-1,3-glc

1UYX | pdb_00001uyx

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with cellobiose

1UYY | pdb_00001uyy

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with cellotriose

1UYZ | pdb_00001uyz

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with xylotetraose

1UZ0 | pdb_00001uz0

Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A in complex with Glc-4Glc-3Glc-4Glc

2CDO | pdb_00002cdo

structure of agarase carbohydrate binding module in complex with neoagarohexaose

2CDP | pdb_00002cdp

Structure of a CBM6 in complex with neoagarohexaose

2VA0 | pdb_00002va0

Differential regulation of the xylan degrading apparatus of Cellvibrio japonicus by a novel two component system

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1UXX | pdb_00001uxx

1UXZ | pdb_00001uxz

1UY0 | pdb_00001uy0

1UYX | pdb_00001uyx

1UYY | pdb_00001uyy

1UYZ | pdb_00001uyz

1UZ0 | pdb_00001uz0

2CDO | pdb_00002cdo

2CDP | pdb_00002cdp

2VA0 | pdb_00002va0