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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Herud-Sikimic, O."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Escherichia coli (6)
	Escherichia coli 55989 (1)
	Escherichia coli K-12 (1)

Taxonomy

Bacteria (8)

Experimental Method

X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (3)

Release Date

2015 - 2019 (8)

Symmetry Type

Cyclic (8)

SCOP Classification

All alpha proteins (8)

AllSelected

1 to 8 of 8 Structures

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Explore in 3D

6EJW \| pdb_00006ejw	Download File View File

Tryptophan Repressor TrpR from E.coli wildtype with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Escherichia coli
Macromolecule	Trp operon repressor (protein)
Unique Ligands	IAC

Explore in 3D

6EJZ \| pdb_00006ejz	Download File View File

Tryptophan Repressor TrpR from E.coli variant S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli 55989
Macromolecule	Trp operon repressor (protein)
Unique Ligands	EDO, IAC, SO4

Explore in 3D

6EKP \| pdb_00006ekp	Download File View File

Tryptophan Repressor TrpR from E.coli variant T44L T81M S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-01-30
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Escherichia coli K-12
Macromolecule	Trp operon repressor (protein)
Unique Ligands	IAC, P3G

Explore in 3D

6ELB \| pdb_00006elb	Download File View File

Tryptophan Repressor TrpR from E.coli variant M42F T44L T81M N87G S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.437 Å
Organisms	Escherichia coli
Macromolecule	Trp operon repressor (protein)
Unique Ligands	IAC

Explore in 3D

6ELF \| pdb_00006elf	Download File View File

Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.832 Å
Organisms	Escherichia coli
Macromolecule	Trp operon repressor (protein)
Unique Ligands	IAC

Explore in 3D

6ELG \| pdb_00006elg	Download File View File

Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetonitrile

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Escherichia coli
Macromolecule	Trp operon repressor (protein)
Unique Ligands	3BO

Explore in 3D

6ENI \| pdb_00006eni	Download File View File

Tryptophan Repressor TrpR from E.coli variant T44L S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Escherichia coli
Macromolecule	Trp operon repressor (protein)
Unique Ligands	EDO, IAC

Explore in 3D

6ENN \| pdb_00006enn	Download File View File

Tryptophan Repressor TrpR from E.coli variant T44L T81M N87G S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.17 Å
Organisms	Escherichia coli
Macromolecule	Trp operon repressor (protein)
Unique Ligands	IAC

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

6EJW | pdb_00006ejw

Tryptophan Repressor TrpR from E.coli wildtype with Indole-3-acetic acid as ligand

6EJZ | pdb_00006ejz

Tryptophan Repressor TrpR from E.coli variant S88Y with Indole-3-acetic acid as ligand

6EKP | pdb_00006ekp

Tryptophan Repressor TrpR from E.coli variant T44L T81M S88Y with Indole-3-acetic acid as ligand

6ELB | pdb_00006elb

Tryptophan Repressor TrpR from E.coli variant M42F T44L T81M N87G S88Y with Indole-3-acetic acid as ligand

6ELF | pdb_00006elf

Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetic acid as ligand

6ELG | pdb_00006elg

Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetonitrile

6ENI | pdb_00006eni

Tryptophan Repressor TrpR from E.coli variant T44L S88Y with Indole-3-acetic acid as ligand

6ENN | pdb_00006enn

Tryptophan Repressor TrpR from E.coli variant T44L T81M N87G S88Y with Indole-3-acetic acid as ligand

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

6EJW | pdb_00006ejw

6EJZ | pdb_00006ejz

6EKP | pdb_00006ekp

6ELB | pdb_00006elb

6ELF | pdb_00006elf

6ELG | pdb_00006elg

6ENI | pdb_00006eni

6ENN | pdb_00006enn