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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Klebe, G."

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Search Summary

This query matches 1,653 Structures.

Refinements

Structure Determination Methodology

experimental (1,653)

Scientific Name of Source Organism

	Cryphonectria parasitica (673)
	Homo sapiens (351)
	Saccharomyces cerevisiae S288C (135)
	Cricetulus griseus (116)
	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (109)
	Hirudo medicinalis (103)
	Bos taurus (81)
	Bacillus thermoproteolyticus (70)
	Zymomonas mobilis (56)
	Mus musculus (22)

More...

Taxonomy

	Eukaryota (1,363)
	Bacteria (260)
	Riboviria (28)
	Eukaryota (eukaryotes) (9)
	other sequences (9)
	Riboviria (RNA viruses and viroids) (2)

Experimental Method

	X-RAY DIFFRACTION (1,647)
	NEUTRON DIFFRACTION (12)

Polymer Entity Type

Protein (1,653)

Refinement Resolution (Å)

	0.5 - 1.0 (100)
	1.0 - 1.5 (883)
	1.5 - 2.0 (602)
	2.0 - 2.5 (66)
	2.5 - 3.0 (7)

Release Date

	2000 - 2004 (38)
	2005 - 2009 (154)
	2010 - 2014 (188)
	2015 - 2019 (724)
	2020 - 2024 (549)

Enzyme Classification Name

	Hydrolases (966)
	Oxidoreductases (134)
	Transferases (314)
	Lyases (79)
	Isomerases (1)

Symmetry Type

	Asymmetric (1,395)
	Cyclic (227)
	Dihedral (31)

SCOP Classification

	All beta proteins (975)
	Alpha and beta proteins (a/b) (404)
	Artifacts (150)
	All alpha proteins (144)
	Alpha and beta proteins (a+b) (107)

AllSelected

1 to 25 of 1,653 Structures

Page 1 of 67

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1EFZ \| pdb_00001efz	Download File View File

MUTAGENESIS AND CRYSTALLOGRAPHIC STUDIES OF ZYMOMONAS MOBILIS TRNA-GUANINE TRANSGLYCOSYLASE TO ELUCIDATE THE ROLE OF SERINE 103 FOR ENZYMATIC ACTIVITY

Gradler, U., Ficner, R., Garcia, G.A., Stubbs, M.T., Klebe, G., Reuter, K.

(1999) FEBS Lett 454: 142-146

Released	2000-03-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Zymomonas mobilis
Macromolecule	TRNA-GUANINE TRANSGLYCOSYLASE (protein)
Unique Ligands	PRF, ZN

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1ENU \| pdb_00001enu	Download File View File

A new target for shigellosis: Rational design and crystallographic studies of inhibitors of tRNA-guanine transglycosylase

Gradler, U., Gerber, H.D., Goodenough-Lashua, D.M., Garcia, G.A., Ficner, R., Reuter, K., Stubbs, M.T., Klebe, G.

(2001) J Mol Biology 306: 455-467

Released	2000-04-19
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Zymomonas mobilis
Macromolecule	TRNA-GUANINE TRANSGLYCOSYLASE (protein)
Unique Ligands	APZ, ZN

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1F3E \| pdb_00001f3e	Download File View File

A NEW TARGET FOR SHIGELLOSIS: RATIONAL DESIGN AND CRYSTALLOGRAPHIC STUDIES OF INHIBITORS OF TRNA-GUANINE TRANSGLYCOSYLASE

Graedler, U., Gerber, H.-D., Goodenough-Lashua, D.M., Garcia, G.A.G., Ficner, R., Reuter, K., Stubbs, M.T., Klebe, G.

(2001) J Mol Biology 306: 455-467

Released	2000-06-15
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Zymomonas mobilis
Macromolecule	QUEUINE TRNA-RIBOSYLTRANSFERASE (protein)
Unique Ligands	DPZ, ZN

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1FJH \| pdb_00001fjh	Download File View File

THE CRYSTAL STRUCTURE OF 3-ALPHA-HYDROXYSTEROID DEHYDROGENASE FROM COMAMONAS TESTOSTERONI, A MEMBER OF THE SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY

Grimm, C., Ficner, R., Maser, E., Klebe, G., Reuter, K.

(2000) J Biological Chem 275: 41333-41339

Released	2001-01-17
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Comamonas testosteroni
Macromolecule	3ALPHA-HYDROXYSTEROID DEHYDROGENASE/CARBONYL REDUCTASE (protein)

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1FK8 \| pdb_00001fk8	Download File View File

THE CRYSTAL STRUCTURE OF THE BINARY COMPLEX WITH NAD OF 3-ALPHA-HYDROXYSTEROID DEHYDROGENASE FROM COMAMONAS TESTOSTERONI, A MEMBER OF THE SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY

Grimm, C., Ficner, R., Maser, E., Klebe, G., Reuter, K.

(2000) J Biological Chem 275: 41333-41339

Released	2001-01-17
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Comamonas testosteroni
Macromolecule	3ALPHA-HYDROXYSTEROID DEHYDROGENASE/CARBONYL REDUCTASE (protein)
Unique Ligands	NAD

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1K4G \| pdb_00001k4g	Download File View File

CRYSTAL STRUCTURE OF TRNA-GUANINE TRANSGLYCOSYLASE (TGT) COMPLEXED WITH 2,6-DIAMINO-8-(1H-IMIDAZOL-2-YLSULFANYLMETHYL)-3H-QUINAZOLINE-4-ONE

Brenk, R., Meyer, E.A., Castellano, R.K., Furler, M., Stubbs, M.T., Klebe, G., Diederich, F.

(2002) Chembiochem 3: 250-253

Released	2002-04-24
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zymomonas mobilis
Macromolecule	TRNA-GUANINE TRANSGLYCOSYLASE (protein)
Unique Ligands	AIQ, ZN

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1K4H \| pdb_00001k4h	Download File View File

CRYSTAL STRUCTURE OF TRNA-GUANINE TRANSGLYCOSYLASE (TGT) COMPLEXED WITH 2,6-Diamino-8-propylsulfanylmethyl-3H-quinazoline-4-one

Brenk, R., Meyer, E.A., Castellano, R.K., Furler, M., Stubbs, M.T., Klebe, G., Diederich, F.

(2002) Chembiochem 3: 250-253

Released	2002-04-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Zymomonas mobilis
Macromolecule	TRNA-GUANINE-TRANSGLYCOSYLASE (protein)
Unique Ligands	APQ, ZN

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1K5H \| pdb_00001k5h	Download File View File

1-deoxy-D-xylulose-5-phosphate reductoisomerase

Reuter, K., Sanderbrand, S., Jomaa, H., Wiesner, J., Steinbrecher, I., Beck, E., Hintz, M., Klebe, G., Stubbs, M.T.

(2002) J Biological Chem 277: 5378-5384

Released	2002-02-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli K-12
Macromolecule	1-deoxy-D-xylulose-5-phosphate reductoisomerase (protein)

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1N2V \| pdb_00001n2v	Download File View File

Crystal Structure of TGT in complex with 2-Butyl-5,6-dihydro-1H-imidazo[4,5-d]pyridazine-4,7-dione

Brenk, R., Naerum, L., Graedler, U., Gerber, H.-D., Garcia, G.A., Reuter, K., Stubbs, M.T., Klebe, G.

(2003) J Med Chem 46: 1133-1143

Released	2003-04-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	BDI, ZN

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1OQ5 \| pdb_00001oq5	Download File View File

CARBONIC ANHYDRASE II IN COMPLEX WITH NANOMOLAR INHIBITOR

Weber, A., Casini, A., Heine, A., Kuhn, D., Supuran, C.T., Scozzafava, A., Klebe, G.

(2004) J Med Chem 47: 550-557

Released	2004-03-23
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase II (protein)
Unique Ligands	CEL, ZN

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1OZM \| pdb_00001ozm	Download File View File

Y106F mutant of Z. mobilis TGT

Brenk, R., Stubbs, M.T., Heine, A., Reuter, K., Klebe, G.

(2003) Chembiochem 4: 1066-1077

Released	2003-09-30
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	ZN

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1OZQ \| pdb_00001ozq	Download File View File

CRYSTAL STRUCTURE OF THE MUTATED TRNA-GUANINE TRANSGLYCOSYLASE (TGT)Y106F COMPLEXED WITH PREQ1

Brenk, R., Stubbs, M.T., Heine, A., Reuter, K., Klebe, G.

(2003) Chembiochem 4: 1066-1077

Released	2003-09-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	PRF, ZN

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1P0B \| pdb_00001p0b	Download File View File

Crystal Structure Of tRNA-Guanine Transglycosylase (TGT) From Zymomonas mobilis Complexed With Archaeosine Precursor, Preq0

Brenk, R., Stubbs, M.T., Heine, A., Reuter, K., Klebe, G.

(2003) Chembiochem 4: 1066-1077

Released	2003-09-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	PQ0, ZN

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1P0D \| pdb_00001p0d	Download File View File

CRYSTAL STRUCTURE OF ZYMOMONAS MOBILIS tRNA-GUANINE TRANSGLYCOSYLASE (TGT) CRYSTALLISED AT PH 5.5

Brenk, R., Stubbs, M.T., Heine, A., Reuter, K., Klebe, G.

(2003) Chembiochem 4: 1066-1077

Released	2003-09-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	ZN

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1P0E \| pdb_00001p0e	Download File View File

CRYSTAL STRUCTURE OF ZYMOMONAS MOBILIS tRNA-GUANINE TRANSGLYCOSYLASE (TGT) COCRYSTALLISED WITH PREQ1 AT PH 5.5

Brenk, R., Stubbs, M.T., Heine, A., Reuter, K., Klebe, G.

(2003) Chembiochem 4: 1066-1077

Released	2003-09-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	PRF, ZN

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1PXG \| pdb_00001pxg	Download File View File

Crystal structure of the mutated tRNA-guanine transglycosylase (TGT) D280E complexed with preQ1

Kittendorf, J.D., Sgraja, T., Reuter, K., Klebe, G., Garcia, G.A.

(2003) J Biological Chem 278: 42369-42376

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	GOL, PRF, ZN

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1Q4W \| pdb_00001q4w	Download File View File

CRYSTAL STRUCTURE OF TGT IN COMPLEX WITH 2,6-DIAMINO-3H-QUINAZOLIN-4-ONE

Brenk, R., Meyer, E., Reuter, K., Stubbs, M.T., Garcia, G.A., Klebe, G.

(2004) J Mol Biology 338: 55-75

Released	2004-04-13
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	DQU, ZN

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1Q63 \| pdb_00001q63	Download File View File

CRYSTAL STRUCTURE OF TGT IN COMPLEX WITH 2,6-Diamino-8-(1H-imidazol-2-ylsulfanylmethyl)-3H-quinazoline-4-one crystallized at pH 5.5

Brenk, R., Meyer, E., Reuter, K., Stubbs, M.T., Garcia, G.A., Klebe, G.

(2004) J Mol Biology 338: 55-75

Released	2004-04-13
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	AIQ, ZN

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1Q65 \| pdb_00001q65	Download File View File

CRYSTAL STRUCTURE OF TGT IN COMPLEX WITH 2,6-DIAMINO-8-(2-dimethylaminoethylsulfanylmethyl)-3H-QUINAZOLIN-4-ONE crystallized at pH 5.5

Brenk, R., Meyer, E., Reuter, K., Stubbs, M.T., Garcia, G.A., Klebe, G.

(2004) J Mol Biology 338: 55-75

Released	2004-04-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	BHB, ZN

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1Q66 \| pdb_00001q66	Download File View File

CRYSTAL STRUCTURE OF TGT IN COMPLEX WITH 2-AMINO-6-AMINOMETHYL-8-phenylsulfanylmethyl-3H-QUINAZOLIN-4-ONE crystallized at pH 5.5

Brenk, R., Meyer, E., Reuter, K., Stubbs, M.T., Garcia, G.A., Klebe, G.

(2004) J Mol Biology 338: 55-75

Released	2004-04-13
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Zymomonas mobilis
Macromolecule	Queuine tRNA-ribosyltransferase (protein)
Unique Ligands	KMB, ZN