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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Lu, Z."

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Search Summary

This query matches 65 Structures.

Refinements

Structure Determination Methodology

experimental (65)

Scientific Name of Source Organism

	Staphylococcus aureus (14)
	Homo sapiens (10)
	Mus musculus (10)
	Bacteroides thetaiotaomicron VPI-5482 (5)
	Chitinophaga pinensis DSM 2588 (5)
	Mytilus edulis (5)
	Bacteroides thetaiotaomicron (4)
	Escherichia coli (3)
	Bacillus subtilis (2)
	Rattus norvegicus (2)

More...

Taxonomy

	Bacteria (37)
	Eukaryota (28)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (56)
	ELECTRON MICROSCOPY (5)
	SOLUTION NMR (4)

Polymer Entity Type

Protein (65)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (31)
	2.0 - 2.5 (11)
	2.5 - 3.0 (7)
	3.0 - 3.5 (2)
	3.5 - 4.0 (5)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (20)
	2005 - 2009 (15)
	2010 - 2014 (10)
	2015 - 2019 (4)
	2020 - 2024 (14)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (23)
	Isomerases (7)
	Lyases (5)
	Oxidoreductases (1)
	Transferases (1)

Membrane Protein Annotation

	mpstruc (7)
	MemProtMD (4)
	PDBTM (4)
	OPM (3)

Symmetry Type

	Asymmetric (46)
	Dihedral (13)
	Cyclic (10)

SCOP Classification

	Alpha and beta proteins (a/b) (22)
	All beta proteins (22)
	Artifacts (2)
	Alpha and beta proteins (a+b) (1)
	All alpha proteins (1)
	Small proteins (1)

AllSelected

1 to 25 of 65 Structures

Page 1 of 3

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1EY0 \| pdb_00001ey0	Download File View File

STRUCTURE OF WILD-TYPE S. NUCLEASE AT 1.6 A RESOLUTION

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EY4 \| pdb_00001ey4	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING MUTANT S59A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EY5 \| pdb_00001ey5	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T33V

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EY6 \| pdb_00001ey6	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T41I

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EY7 \| pdb_00001ey7	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING MUTANT S128A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EY8 \| pdb_00001ey8	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING TRIPLE MUTANT P117G/H124L/S128A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EY9 \| pdb_00001ey9	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING QUADRUPLE MUTANT T41I/P117G/H124L/S128A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EYA \| pdb_00001eya	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING QUINTUPLE MUTANT T33V/T41I/P117G/H124L/S128A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EYC \| pdb_00001eyc	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING QUINTUPLE MUTANT T41I/S59A/P117G/H124L/S128A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EYD \| pdb_00001eyd	Download File View File

STRUCTURE OF WILD-TYPE S. NUCLEASE AT 1.7 A RESOLUTION

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EZ6 \| pdb_00001ez6	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING SEXTUPLE MUTANT T33V/T41I/S59A/P117G/H124L/S128A

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1EZ8 \| pdb_00001ez8	Download File View File

STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T33V

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2000) J Mol Biology 303: 125-130

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1IHZ \| pdb_00001ihz	Download File View File

Structure of S. nuclease mutant quintuple mutant V23L/V66L/I72L/I92L/V99L

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2004) Biophys Chem 110: 239-248

Released	2003-06-17
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1II3 \| pdb_00001ii3	Download File View File

Structure of S. nuclease quintuple mutant V23I/V66L/I72L/I92L/V99L

Chen, J., Lu, Z., Sakon, J., Stites, W.E.

(2004) Biophys Chem 110: 239-248

Released	2003-06-17
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Staphylococcus aureus
Macromolecule	STAPHYLOCOCCAL NUCLEASE (protein)

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1LIR \| pdb_00001lir	Download File View File

LQ2 FROM LEIURUS QUINQUESTRIATUS, NMR, 22 STRUCTURES

Renisio, J.G., Lu, Z., Blanc, E., Jin, W., Lewis, J.H., Bornet, O., Darbon, H.

(1999) Proteins 34: 417-426

Released	1998-06-17
Method	SOLUTION NMR
Organisms	Leiurus hebraeus
Macromolecule	LQ2 (protein)

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1M1B \| pdb_00001m1b	Download File View File

Crystal Structure of Phosphoenolpyruvate Mutase Complexed with Sulfopyruvate

Liu, S., Lu, Z., Jia, Y., Dunaway-Mariano, D., Herzberg, O.

(2002) Biochemistry 41: 10270-10276

Released	2002-08-28
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mytilus edulis
Macromolecule	PHOSPHOENOLPYRUVATE PHOSPHOMUTASE (protein)
Unique Ligands	MG, SPV

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1OQF \| pdb_00001oqf	Download File View File

Crystal structure of the 2-methylisocitrate lyase

Liu, S., Lu, Z., Dunaway-Mariano, D., Herzberg, O., Structure 2 Function Project (S2F)

(2005) Biochemistry 44: 2949-2962

Released	2004-04-27
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Escherichia coli
Macromolecule	2-methylisocitrate lyase (protein)

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1S2T \| pdb_00001s2t	Download File View File

Crystal Structure Of Apo Phosphoenolpyruvate Mutase

Liu, S., Lu, Z., Han, Y., Jia, Y., Howard, A., Dunaway-Mariano, D., Herzberg, O.

(2004) Biochemistry 43: 4447-4453

Released	2004-05-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mytilus edulis
Macromolecule	Phosphoenolpyruvate phosphomutase (protein)

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1S2U \| pdb_00001s2u	Download File View File

Crystal structure of the D58A phosphoenolpyruvate mutase mutant protein

Liu, S., Lu, Z., Han, Y., Jia, Y., Howard, A., Dunaway-Mariano, D., Herzberg, O.

(2004) Biochemistry 43: 4447-4453

Released	2004-05-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mytilus edulis
Macromolecule	Phosphoenolpyruvate phosphomutase (protein)
Unique Ligands	PEG

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1S2V \| pdb_00001s2v	Download File View File

Crystal structure of phosphoenolpyruvate mutase complexed with Mg(II)

Liu, S., Lu, Z., Han, Y., Jia, Y., Howard, A., Dunaway-Mariano, D., Herzberg, O.

(2004) Biochemistry 43: 4447-4453

Released	2004-05-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mytilus edulis
Macromolecule	Phosphoenolpyruvate phosphomutase (protein)
Unique Ligands	MG

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1S2W \| pdb_00001s2w	Download File View File

Crystal structure of phosphoenolpyruvate mutase in high ionic strength

Liu, S., Lu, Z., Han, Y., Jia, Y., Howard, A., Dunaway-Mariano, D., Herzberg, O.

(2004) Biochemistry 43: 4447-4453

Released	2004-05-04
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Mytilus edulis
Macromolecule	Phosphoenolpyruvate phosphomutase (protein)
Unique Ligands	SO4

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1XG3 \| pdb_00001xg3	Download File View File

Crystal structure of the C123S 2-methylisocitrate lyase mutant from Escherichia coli in complex with the reaction product, Mg(II)-pyruvate and succinate

Liu, S., Lu, Z., Han, Y., Melamud, E., Dunaway-Mariano, D., Herzberg, O.

(2005) Biochemistry 44: 2949-2962

Released	2005-03-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	Probable methylisocitrate lyase (protein)
Unique Ligands	MG, PYR, SIN

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1XG4 \| pdb_00001xg4	Download File View File

Crystal Structure of the C123S 2-Methylisocitrate Lyase Mutant from Escherichia coli in complex with the inhibitor isocitrate

Liu, S., Lu, Z., Han, Y., Melamud, E., Dunaway-Mariano, D., Herzberg, O.

(2005) Biochemistry 44: 2949-2962

Released	2005-03-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli
Macromolecule	Probable methylisocitrate lyase (protein)
Unique Ligands	ICT, MG

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1YMQ \| pdb_00001ymq	Download File View File

HAD Superfamily Phosphotransferase Substrate Diversification: Structure and Function Analysis of the HAD Subclass IIB Sugar Phosphatase BT4131

Lu, Z., Dunaway-Mariano, D., Allen, K.N.

(2005) Biochemistry 44: 8684-8696

Released	2005-06-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacteroides thetaiotaomicron VPI-5482
Macromolecule	sugar-phosphate phosphatase BT4131 (protein)
Unique Ligands	MG, SO4