RCSB PDB: Search

2CDE \| pdb_00002cde	Download File View File

Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide specific T cell receptors - iNKT-TCR

Gadola, S.D., Koch, M., Marles-Wright, J., Lissin, N.M., Sheperd, D., Matulis, G., Harlos, K., Villiger, P.M., Stuart, D.I., Jakobsen, B.K., Cerundolo, V., Jones, E.Y.

(2006) J Exp Medicine 203: 699

Released	2006-03-07
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	INKT-TCR (protein)

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2CDF \| pdb_00002cdf	Download File View File

Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide-specific T cell receptors (TCR 5E)

Gadola, S.D., Koch, M., Marles-Wright, J., Lissin, N.M., Sheperd, D., Matulis, G., Harlos, K., Villiger, P.M., Stuart, D.I., Jakobsen, B.K., Cerundolo, V., Jones, E.Y.

(2006) J Exp Medicine 203: 699

Released	2006-03-07
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	TCR 5E (protein)

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2CDG \| pdb_00002cdg	Download File View File

Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide-specific T cell receptors (TCR 5B)

Gadola, S.D., Koch, M., Marles-Wright, J., Lissin, N.M., Sheperd, D., Matulis, G., Harlos, K., Villiger, P.M., Stuart, D.I., Jakobsen, B.K., Cerundolo, V., Jones, E.Y.

(2006) J Exp Medicine 203: 699

Released	2006-03-07
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	TCR 5E (protein)

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2J6Y \| pdb_00002j6y	Download File View File

Structural and Functional Characterisation of partner switching regulating the environmental stress response in Bacillus subtilis

Hardwick, S.W., Pane-Farre, J., Delumeau, O., Marles-Wright, J., Murray, J.W., Hecker, M., Lewis, R.J.

(2007) J Biological Chem 282: 11562-11572

Released	2007-02-13
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Bacillus subtilis
Macromolecule	PHOSPHOSERINE PHOSPHATASE RSBU (protein)

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2J6Z \| pdb_00002j6z	Download File View File

Structural and functional characterisation of partner-switching regulating the environmental stress response in B. subtilis

Hardwick, S.W., Pane-Farre, J., Delumeau, O., Marles-Wright, J., Murray, J.W., Hecker, M., Lewis, R.J.

(2007) J Biological Chem 282: 11562-11572

Released	2007-02-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Bacillus subtilis
Macromolecule	PHOSPHOSERINE PHOSPHATASE RSBU (protein)

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2J70 \| pdb_00002j70	Download File View File

Structural and functional characterisation of partner-switching regulating the environmental stress response in B. subtilis

Hardwick, S.W., Pane-Farre, J., Delumeau, O., Marles-Wright, J., Murray, J.W., Hecker, M., Lewis, R.J.

(2007) J Biological Chem 282: 11562-11572

Released	2007-02-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Bacillus subtilis
Macromolecule	PHOSPHOSERINE PHOSPHATASE RSBU (protein)

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2VSH \| pdb_00002vsh	Download File View File

Synthesis of CDP-activated ribitol for teichoic acid precursors in Streptococcus pneumoniae

Baur, S., Marles-Wright, J., Buckenmaier, S., Lewis, R.J., Vollmer, W.

(2009) J Bacteriol 191: 1200

Released	2008-12-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptococcus pneumoniae
Macromolecule	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE (protein)
Unique Ligands	1PE, CA, P6G, PEG, PG4

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2VSI \| pdb_00002vsi	Download File View File

Synthesis of CDP-activated ribitol for teichoic acid precursors in Streptococcus pneumoniae

Baur, S., Marles-Wright, J., Buckenmaier, S., Lewis, R.J., Vollmer, W.

(2009) J Bacteriol 191: 1200

Released	2008-12-30
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Streptococcus pneumoniae
Macromolecule	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE (protein)
Unique Ligands	CA, CDF

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2VY9 \| pdb_00002vy9	Download File View File

Molecular architecture of the stressosome, a signal integration and transduction hub

Marles-Wright, J., Grant, T., Delumeau, O., van Duinen, G., Firbank, S.J., Lewis, P.J., Murray, J.W., Newman, J.A., Quin, M.B., Race, P.R., Rohou, A., Tichelaar, W., van Heel, M., Lewis, R.J.

(2008) Science 322: 92

Released	2008-10-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Moorella thermoacetica
Macromolecule	ANTI-SIGMA-FACTOR ANTAGONIST (protein)

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2W8D \| pdb_00002w8d	Download File View File

Distinct and essential morphogenic functions for wall- and lipo- teichoic acids in Bacillus subtilis

Schirner, K., Marles-Wright, J., Lewis, R.J., Errington, J.

(2009) EMBO J 28: 830

Released	2009-03-03
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Bacillus subtilis
Macromolecule	PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID SYNTHASE 2 (protein)
Unique Ligands	MG, PEG, PG4

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2XXP \| pdb_00002xxp	Download File View File

A widespread family of bacterial cell wall assembly proteins

Marles-Wright, J., Kawai, Y., Emmins, R., Ishikawa, S., Kuwano, M., Heinz, N., Cleverley, R.M., Bui, N.K., Ogasawara, N., Lewis, R.J., Vollmer, W., Daniel, R.A., Errington, J.

(2011) EMBO J 30: 4931

Released	2011-10-19
Method	X-RAY DIFFRACTION 1.692 Å
Organisms	Streptococcus pneumoniae D39
Macromolecule	CPS2A (protein)
Unique Ligands	DSL, PEG

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2XXQ \| pdb_00002xxq	Download File View File

A widespread family of bacterial cell wall assembly proteins

Marles-Wright, J., Kawai, Y., Emmins, R., Ishikawa, S., Kuwano, M., Heinz, N., Cleverley, R.M., Bui, N.K., Ogasawara, N., Lewis, R.J., Vollmer, W., Daniel, R.A., Errington, J.

(2011) EMBO J 30: 4931

Released	2011-10-19
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Streptococcus pneumoniae D39
Macromolecule	CPS2A (protein)
Unique Ligands	ACT, EDO, ZTP

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2Y0O \| pdb_00002y0o	Download File View File

The structure of a D-lyxose isomerase from the sigmaB regulon of Bacillus subtilis

Marles-Wright, J., Lewis, R.J.

(2011) Proteins 79: 2015

Released	2011-05-25
Method	X-RAY DIFFRACTION 1.229 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	PROBABLE D-LYXOSE KETOL-ISOMERASE (protein)
Unique Ligands	ARS, SO4, ZN

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3QED \| pdb_00003qed	Download File View File

The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases

Cartmell, A., Mckee, L.S., Pena, M., Larsbrink, J., Brumer, H., Lewis, R.J., Viks-Nielsen, A., Gilbert, H.J., Marles-Wright, J.

(2011) J Biological Chem 286: 15483-15495

Released	2011-02-16
Method	X-RAY DIFFRACTION 2.99 Å
Organisms	Cellvibrio japonicus Ueda107
Macromolecule	Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N (protein)
Unique Ligands	CA, SO4, TAM

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3QEE \| pdb_00003qee	Download File View File

The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases

Cartmell, A., Mckee, L.S., Pena, M., Larsbrink, J., Brumer, H., Lewis, R.J., Viks-Nielsen, A., Gilbert, H.J., Marles-Wright, J.

(2011) J Biological Chem 286: 15483-15495

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Cellvibrio japonicus Ueda107
Macromolecule	Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N (protein)
Unique Ligands	ACT, CA

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3QEF \| pdb_00003qef	Download File View File

The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases

Cartmell, A., Mckee, L.S., Pena, M., Larsbrink, J., Brumer, H., Lewis, R.J., Viks-Nielsen, A., Gilbert, H.J., Marles-Wright, J.

(2011) J Biological Chem 286: 15483-15495

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.789 Å
Organisms	Cellvibrio japonicus Ueda107
Macromolecule	Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N (protein)
Unique Ligands	CA, EDO
Unique branched monosaccharides	AHR

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3TEL \| pdb_00003tel	Download File View File

LytR-CPS2A-Psr family protein with bound octaprenyl pyrophosphate lipid and manganese ion

Kawai, Y., Marles-Wright, J., Cleverley, R.M., Emmins, R., Ishikawa, S., Kuwano, M., Heinz, N., Khai Bui, N., Hoyland, C.N., Ogasawara, N., Lewis, R.J., Vollmer, W., Daniel, R.A., Errington, J.

(2011) EMBO J 30: 4931-4941

Released	2011-10-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptococcus pneumoniae
Macromolecule	Cps2A, Integral membrane regulatory protein Wzg (protein)
Unique Ligands	ACT, EDO, MN, ZTP

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3TEP \| pdb_00003tep	Download File View File

LytR-CPS2a-Psr family protein with bound octaprenyl pyrophosphate lipid and magnesium ion

Kawai, Y., Marles-Wright, J., Cleverley, R.M., Emmins, R., Ishikawa, S., Kuwano, M., Heinz, N., Khai Bui, N., Hoyland, C.N., Ogasawara, N., Lewis, R.J., Vollmer, W., Daniel, R.A., Errington, J.

(2011) EMBO J 30: 4931-4941

Released	2011-10-12
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Streptococcus pneumoniae
Macromolecule	CPS2A, Integral membrane regulatory protein Wzg (protein)
Unique Ligands	EDO, MG, ZTP

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3TFL \| pdb_00003tfl	Download File View File

LytR-Cps2a-Psr family protein with bound octaprenyl pyrophosphate lipid

Kawai, Y., Marles-Wright, J., Cleverley, R.M., Emmins, R., Ishikawa, S., Kuwano, M., Heinz, N., Khai Bui, N., Hoyland, C.N., Ogasawara, N., Lewis, R.J., Vollmer, W., Daniel, R.A., Errington, J.

(2011) EMBO J 30: 4931-4941

Released	2011-10-12
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Streptococcus pneumoniae
Macromolecule	CPS2A, Integral membrane regulatory protein Wzg (protein)
Unique Ligands	EDO, ZTP

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3ZT9 \| pdb_00003zt9	Download File View File

The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling

Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J.

(2012) Structure 20: 350

Released	2012-02-22
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Moorella thermoacetica
Macromolecule	SERINE PHOSPHATASE (protein)
Unique Ligands	MN, PEG

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3ZTA \| pdb_00003zta	Download File View File

The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling

Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J.

(2012) Structure 20: 350

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Moorella thermoacetica
Macromolecule	ANTI-SIGMA-FACTOR ANTAGONIST (STAS) DOMAIN PROTEIN (protein)

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3ZTB \| pdb_00003ztb	Download File View File

The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling

Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J.

(2012) Structure 20: 350

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Moorella thermoacetica
Macromolecule	ANTI-SIGMA-FACTOR ANTAGONIST (STAS) DOMAIN PROTEIN (protein)
Unique Ligands	IOD

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3ZXJ \| pdb_00003zxj	Download File View File

Engineering the active site of a GH43 glycoside hydrolase generates a biotechnologically significant enzyme that displays both endo- xylanase and exo-arabinofuranosidase activity

McKee, L.S., Pena, M.J., Rogowski, A., Jackson, A., Lewis, R.J., York, W.S., Krogh, K.B.R.M., Vikso-Nielsen, A., Skjot, M., Gilbert, H.J., Marles-Wright, J.

(2012) Proc Natl Acad Sci U S A 109: 6537

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mycothermus thermophilus
Macromolecule	HIAXHD3 (protein)
Unique Ligands	BTB, PEG, SO4

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3ZXK \| pdb_00003zxk	Download File View File

Engineering the active site of a GH43 glycoside hydrolase generates a biotechnologically significant enzyme that displays both endo- xylanase and exo-arabinofuranosidase activity

McKee, L.S., Pena, M.J., Rogowski, A., Jackson, A., Lewis, R.J., York, W.S., Krogh, K.B.R.M., Vikso-Nielsen, A., Skjot, M., Gilbert, H.J., Marles-Wright, J.

(2012) Proc Natl Acad Sci U S A 109: 6537

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.44 Å
Organisms	Mycothermus thermophilus
Macromolecule	HIAXHD3 (protein)
Unique Ligands	EPE
Unique branched monosaccharides	AHR, XYP

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3ZXL \| pdb_00003zxl	Download File View File

Engineering the active site of a GH43 glycoside hydrolase generates a biotechnologically significant enzyme that displays both endo- xylanase and exo-arabinofuranosidase activity

McKee, L.S., Pena, M.J., Rogowski, A., Jackson, A., Lewis, R.J., York, W.S., Krogh, K.B.R.M., Vikso-Nielsen, A., Skjot, M., Gilbert, H.J., Marles-Wright, J.

(2012) Proc Natl Acad Sci U S A 109: 6537

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.871 Å
Organisms	Mycothermus thermophilus
Macromolecule	HIAXHD3 (protein)
Unique Ligands	B3P

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2CDE | pdb_00002cde

2CDF | pdb_00002cdf

2CDG | pdb_00002cdg

2J6Y | pdb_00002j6y

2J6Z | pdb_00002j6z

2J70 | pdb_00002j70

2VSH | pdb_00002vsh

2VSI | pdb_00002vsi

2VY9 | pdb_00002vy9

2W8D | pdb_00002w8d

2XXP | pdb_00002xxp

2XXQ | pdb_00002xxq

2Y0O | pdb_00002y0o

3QED | pdb_00003qed

3QEE | pdb_00003qee

3QEF | pdb_00003qef

3TEL | pdb_00003tel

3TEP | pdb_00003tep

3TFL | pdb_00003tfl

3ZT9 | pdb_00003zt9

3ZTA | pdb_00003zta

3ZTB | pdb_00003ztb

3ZXJ | pdb_00003zxj

3ZXK | pdb_00003zxk

3ZXL | pdb_00003zxl