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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Qian, P."

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Search Summary

This query matches 23 Structures.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

	Gemmatimonas phototrophica (4)
	Cereibacter sphaeroides 2.4.1 (3)
	Homo sapiens (3)
	Rhodopseudomonas palustris (3)
	Rhodopseudomonas palustris CGA009 (2)
	Blastochloris viridis (1)
	Cereibacter sphaeroides (1)
	Codium fragile (1)
	Marichromatium purpuratum 984 (1)
	Rhodopseudomonas palustris ATCC 17001 (1)

More...

Taxonomy

	Bacteria (17)
	Eukaryota (5)
	Riboviria (1)

Experimental Method

	ELECTRON MICROSCOPY (22)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

	Protein (23)
	RNA (1)

Refinement Resolution (Å)

	2.0 - 2.5 (5)
	2.5 - 3.0 (12)
	3.0 - 3.5 (3)
	3.5 - 4.0 (2)
	> 4.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (2)
	2020 - 2024 (20)

Enzyme Classification Name

	Hydrolases (1)
	Transferases (1)
	Translocases (1)

Membrane Protein Annotation

	OPM (20)
	PDBTM (13)
	mpstruc (9)
	MemProtMD (6)

Symmetry Type

	Asymmetric (14)
	Cyclic (8)
	Dihedral (1)

SCOP Classification

	Membrane and cell surface proteins and peptides (4)
	All beta proteins (3)
	All alpha proteins (1)

AllSelected

1 to 23 of 23 Structures

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4V9G \| pdb_00004v9g	Download File View File

RC-LH1-PufX dimer complex from Rhodobacter sphaeroides

Qian, P., Papiz, M.Z., Jackson, P.J., Brindley, A.A., Ng, I.W., Olsen, J.D., Dickman, M.J., Bullough, P.A., Hunter, C.N.

(2013) Biochemistry 52: 7575-7585

Released	2014-07-09
Method	X-RAY DIFFRACTION 7.78 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Unique protein chains: 6
Unique Ligands	BCL, BPH, FE2, PO4, SPO, U10

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6ET5 \| pdb_00006et5	Download File View File

Reaction centre light harvesting complex 1 from Blc. virids

Qian, P., Siebert, C.A., Canniffe, D.P., Wang, P., Hunter, C.N.

(2018) Nature 556: 203-208

Released	2018-04-11
Method	ELECTRON MICROSCOPY 2.87 Å
Organisms	Blastochloris viridis
Macromolecule	Unique protein chains: 7
Unique Ligands	BCB, BPB, FE, HEM, LDA, MQ9, NS0, NS5, SO4, UQ9

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6RQF \| pdb_00006rqf	Download File View File

3.6 Angstrom cryo-EM structure of the dimeric cytochrome b6f complex from Spinacia oleracea with natively bound thylakoid lipids and plastoquinone molecules

Malone, L.A., Qian, P., Mayneord, G.E., Hitchcock, A., Farmer, D., Thompson, R., Swainsbury, D.J.K., Ranson, N., Hunter, C.N., Johnson, M.P.

(2019) Nature 575: 535-539

Released	2019-11-13
Method	ELECTRON MICROSCOPY 3.58 Å
Organisms	Spinacia oleracea
Macromolecule	Unique protein chains: 8
Unique Ligands	6PL, BCR, CLA, FES, HEC, HEM, LMG, PGV, PL9, SQD

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6Z5R \| pdb_00006z5r	Download File View File

RC-LH1(16) complex from Rhodopseudomonas palustris

Swainsbury, D.J.K., Qian, P., Hitchcock, A., Hunter, C.N.

(2021) Sci Adv 7:

Released	2021-01-13
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Rhodopseudomonas palustris CGA009
Macromolecule	H subunit of photosynthetic reaction center complex (protein) Light-harvesting complex 1 alpha chain (protein) Light-harvesting complex 1 beta chain (protein) Reaction center protein L chain (protein) Reaction center protein M chain (protein)
Unique Ligands	6PL, BCL, BPH, CDL, CRT, FE, LMT, PGT, QAK, U10

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6Z5S \| pdb_00006z5s	Download File View File

RC-LH1(14)-W complex from Rhodopseudomonas palustris

Swainsbury, D.J.K., Qian, P., Hitchcock, A., Hunter, C.N.

(2021) Sci Adv 7:

Released	2021-01-13
Method	ELECTRON MICROSCOPY 2.65 Å
Organisms	Rhodopseudomonas palustris CGA009
Macromolecule	Unique protein chains: 6
Unique Ligands	6PL, BCL, BPH, CDL, CRT, FE, LMT, PGT, QAK, U10

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6ZXA \| pdb_00006zxa	Download File View File

LH2 complex from Marichromatium purpuratum

Gardiner, A.T., Naydenova, K., Castro-Hartmann, P., Nguyen-Phan, T.C., Russo, C.J., Sader, K., Hunter, C.N., Cogdell, R.J., Qian, P.

(2021) Sci Adv 7:

Released	2021-02-24
Method	ELECTRON MICROSCOPY 2.38 Å
Organisms	Marichromatium purpuratum 984
Macromolecule	LHC domain-containing protein (protein) Light-harvesting protein B:800-850 subunit beta (protein)
Unique Ligands	BCL, QS2, QSE

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7AAP \| pdb_00007aap	Download File View File

Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP

Naydenova, K., Muir, K.W., Wu, L.F., Zhang, Z., Coscia, F., Peet, M., Castro-Hartman, P., Qian, P., Sader, K., Dent, K., Kimanius, D., Sutherland, J.D., Lowe, J., Barford, D., Russo, C.J.

(2021) Proc Natl Acad Sci U S A 118:

Released	2020-09-23
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 12 (protein) Non-structural protein 7 (protein) Non-structural protein 8 (protein) RNA (5'-R(PUPUPAPAPGPUPUPAPU)-3') (nucleic acid) RNA (5'-R(PUPUPCPAPUPAPAPCPUPUPAP*A)-3') (nucleic acid)
Unique Ligands	GE6, MG, POP, ZN

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7O0U \| pdb_00007o0u	Download File View File

Cryo-EM structure (model_1a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.4 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.35 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 9
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7O0V \| pdb_00007o0v	Download File View File

Cryo-EM structure (model_2a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.5 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 12
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7O0W \| pdb_00007o0w	Download File View File

Cryo-EM structure of the RC-dLH complex (model_1b) from Gemmatimonas phototrophica at 2.47 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.47 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 11
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7O0X \| pdb_00007o0x	Download File View File

Cryo-EM structure (model_2b) of the RC-dLH complex from Gemmatimonas phototrophica at 2.44 A

Qian, P., Koblizek, M.

(2022) Sci Adv 8: eabk3139-eabk3139

Released	2022-03-02
Method	ELECTRON MICROSCOPY 2.44 Å
Organisms	Gemmatimonas phototrophica
Macromolecule	Unique protein chains: 11
Unique Ligands	0V9, BCL, BPH, CD4, CRT, FE, HEC, LMT, MQ8, NDG, PGW, UYH, V75, V7B, V7N
Unique branched monosaccharides	MAN, RAM

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7OY8 \| pdb_00007oy8	Download File View File

Cryo-EM structure of the Rhodospirillum rubrum RC-LH1 complex

Qian, P., Croll, T.I., Castro, H.P., Moriarty, N.W., sader, K., Hunter, C.N.

(2021) Biochem J 478: 3253-3263

Released	2021-09-22
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Rhodospirillum rubrum ATCC 11170
Macromolecule	Unique protein chains: 6
Unique Ligands	07D, BPH, CD4, CL, CRT, FE, LMT, PGW, PO4, RQ0, U10

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7PBW \| pdb_00007pbw	Download File View File

Cryo-EM structure of light harvesting complex 2 from Rba. sphaeroides.

Qian, P., Swainsbury, D.J.K., Croll, T.I., Castro-Hartmann, P., Sader, K., Divitini, G., Hunter, C.N.

(2021) Biochemistry 60: 3302-3314

Released	2021-11-24
Method	ELECTRON MICROSCOPY 2.1 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Light-harvesting protein B-800/850 alpha chain (protein) Light-harvesting protein B-800/850 beta chain (protein)
Unique Ligands	7OT, BCL, CA, LDA

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7PHI \| pdb_00007phi	Download File View File

Human voltage-gated potassium channel Kv3.1 (with Zn)

Chi, G., Qian, P., Castro-Hartmann, P., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Fernandez-Cid, A., Marsden, B., MacLean, E.M., Pike, A.C.W., Sader, K., Burgess-Brown, N.A., Duerr, K.L.

(2022) Nat Commun 13: 4087-4087

Released	2022-03-02
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens
Macromolecule	Potassium voltage-gated channel, Shaw-related subfamily, member 1 (protein)
Unique Ligands	K, PCF, ZN

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7PHK \| pdb_00007phk	Download File View File

Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)

Chi, G., Qian, P., Castro-Hartmann, P., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Marsden, B., MacLean, E.M., Fernandez-Cid, A., Pike, A.C.W., Sader, K., Burgess-Brown, N.A., Duerr, K.L.

(2022) Nat Commun 13: 4087-4087

Released	2022-03-02
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens
Macromolecule	Potassium voltage-gated channel, Shaw-related subfamily, member 1 (protein)
Unique Ligands	K, PCF, ZN

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7PHL \| pdb_00007phl	Download File View File

Human voltage-gated potassium channel Kv3.1 (with EDTA)

Chi, G., Qian, P., Castro-Hartmann, P., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Fernandez-Cid, A., Pike, A.C.W., Marsden, B., MacLean, E.M., Sader, K., Burgess-Brown, N.A., Duerr, K.L.

(2022) Nat Commun 13: 4087-4087

Released	2022-03-02
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Homo sapiens
Macromolecule	Potassium voltage-gated channel, Shaw-related subfamily, member 1 (protein)
Unique Ligands	K, PCF, ZN

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7PIL \| pdb_00007pil	Download File View File

Cryo-EM structure of the Rhodobacter sphaeroides RC-LH1-PufXY monomer complex at 2.5 A

Qian, P., Hunter, C.N.

(2021) Biochem J 478: 3775-3790

Released	2021-10-13
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Unique protein chains: 7
Unique Ligands	3PE, BCL, BPH, CD4, FE, LMT, SPO, U10, UQ1

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7PQD \| pdb_00007pqd	Download File View File

Cryo-EM structure of the dimeric Rhodobacter sphaeroides RC-LH1 core complex at 2.9 A: the structural basis for dimerisation

Qian, P., Hunter, C.N.

(2021) Biochem J 478: 3923-3937

Released	2021-11-24
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Unique protein chains: 8
Unique Ligands	3PE, BCL, BPH, CD4, FE, LMT, SP2, SQD, U10, UQ1

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7WLM \| pdb_00007wlm	Download File View File

The Cryo-EM structure of siphonaxanthin chlorophyll a/b type light-harvesting complex II

Seki, S., Nakaniwa, T., Castro-Hartmann, P., Sader, K., Kawamoto, A., Tanaka, H., Qian, P., Kurisu, G., Fujii, R.

(2022) BBA Adv 2: 100064-100064

Released	2022-11-23
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Codium fragile
Macromolecule	siphonaxanthin chlorophyll a/b binding light-harvesting complex II (protein)
Unique Ligands	0IE, 0UR, CHL, CLA, LHG, NEX

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7ZCU \| pdb_00007zcu	Download File View File

PucA-LH2 complex from Rps. palustris

Qian, P., Cogdell, R.J.

(2022) Proc Natl Acad Sci U S A 119: e2210109119-e2210109119

Released	2022-10-12
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Rhodopseudomonas palustris ATCC 17001
Macromolecule	Light-harvesting protein B-800-850 alpha chain (protein) Light-harvesting protein B-800-850 beta chain (protein) PucA-LH2-gamma (protein)
Unique Ligands	BCL, IRM

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7ZDI \| pdb_00007zdi	Download File View File

PucB-LH2 complex from Rps. palustris

Qian, P., Cogdell, R.J., Nguyen-Phan, T.C.

(2022) Proc Natl Acad Sci U S A 119: e2210109119-e2210109119

Released	2022-10-05
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Rhodopseudomonas palustris
Macromolecule	Light-harvesting protein (protein) PucA-LH2-gamma (protein)
Unique Ligands	BCL, IRM

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7ZE3 \| pdb_00007ze3	Download File View File

PucD-LH2 complex from Rps. palustris

Qian, P., Cogdell, R.J., Nguyen-Phan, T.C.

(2022) Proc Natl Acad Sci U S A 119: e2210109119-e2210109119

Released	2022-10-05
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Rhodopseudomonas palustris
Macromolecule	Light-harvesting protein B-800-850 alpha chain (protein) Light-harvesting protein B-800-850 beta chain (protein) PucA-LH2-gamma (protein)
Unique Ligands	BCL, ZE0

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7ZE8 \| pdb_00007ze8	Download File View File

PucE-LH2 complex from Rps. palustris

Qian, P., Cogdell, R.J., Nguyen-Phan, T.C.

(2022) Proc Natl Acad Sci U S A 119: e2210109119-e2210109119

Released	2022-10-05
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Rhodopseudomonas palustris
Macromolecule	Light-harvesting protein (protein) PucA-LH2-gamma (protein)
Unique Ligands	BCL, IRM

1 to 23 of 23 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

4V9G | pdb_00004v9g

6ET5 | pdb_00006et5

6RQF | pdb_00006rqf

6Z5R | pdb_00006z5r

6Z5S | pdb_00006z5s

6ZXA | pdb_00006zxa

7AAP | pdb_00007aap

7O0U | pdb_00007o0u

7O0V | pdb_00007o0v

7O0W | pdb_00007o0w

7O0X | pdb_00007o0x

7OY8 | pdb_00007oy8

7PBW | pdb_00007pbw

7PHI | pdb_00007phi

7PHK | pdb_00007phk

7PHL | pdb_00007phl

7PIL | pdb_00007pil

7PQD | pdb_00007pqd

7WLM | pdb_00007wlm

7ZCU | pdb_00007zcu

7ZDI | pdb_00007zdi

7ZE3 | pdb_00007ze3

7ZE8 | pdb_00007ze8