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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Croll, T.I."

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Search Summary

This query matches 804 Structures.

Refinements

Structure Determination Methodology

experimental (804)

Scientific Name of Source Organism

	Severe acute respiratory syndrome coronavirus 2 (486)
	Homo sapiens (122)
	Escherichia coli (34)
	synthetic construct (33)
	Escherichia coli K-12 (25)
	Mus musculus (15)
	Influenza A virus (9)
	Bos taurus (8)
	Rattus norvegicus (8)
	Arabidopsis thaliana (7)

More...

Taxonomy

	Riboviria (515)
	Eukaryota (184)
	Bacteria (110)
	other sequences (33)
	Archaea (5)
	Varidnaviria (3)

Experimental Method

	X-RAY DIFFRACTION (682)
	ELECTRON MICROSCOPY (121)
	ELECTRON CRYSTALLOGRAPHY (1)
	NEUTRON DIFFRACTION (1)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (799)
	DNA (43)
	RNA (15)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (84)
	1.5 - 2.0 (403)
	2.0 - 2.5 (133)
	2.5 - 3.0 (84)
	3.0 - 3.5 (56)
	3.5 - 4.0 (25)
	4.0 - 4.5 (13)
	> 4.5 (6)

Release Date

	2015 - 2019 (11)
	2020 - 2024 (742)
	2025 - 2029 (51)

Enzyme Classification Name

	Hydrolases (558)
	Transferases (35)
	Oxidoreductases (12)
	Lyases (9)
	Isomerases (6)
	Translocases (3)
	Ligases (4)

Membrane Protein Annotation

	OPM (20)
	PDBTM (22)
	mpstruc (10)
	MemProtMD (7)

Symmetry Type

	Cyclic (547)
	Asymmetric (218)
	Dihedral (29)
	Icosahedral (7)

SCOP Classification

	All beta proteins (5)
	Alpha and beta proteins (a+b) (4)
	Alpha and beta proteins (a/b) (3)
	All alpha proteins (1)

AllSelected

1 to 25 of 804 Structures

Page 1 of 33

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4ZXB \| pdb_00004zxb	Download File View File

Structure of the human insulin receptor ectodomain, IRDeltabeta construct, in complex with four Fab molecules

Croll, T., Smith, B.J., Margetts, M.B., Whittaker, J., Weiss, M.A., Ward, C.W., Lawrence, M.C.

(2016) Structure 24: 469-476

Released	2016-02-24
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Fab 83-14 heavy chain (protein) Fab 83-14 light chain (protein) Fab 83-7 heavy chain (protein) Fab 83-7 light chain (protein) Insulin receptor (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, FUC, MAN, NAG

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5JPM \| pdb_00005jpm	Download File View File

Structure of the complex of human complement C4 with MASP-2 rebuilt using iMDFF

Croll, T.I., Andersen, G.R.

(2016) Acta Crystallogr D Struct Biol 72: 1006-1016

Released	2016-08-10
Method	X-RAY DIFFRACTION 3.75 Å
Organisms	Homo sapiens
Macromolecule	Complement C4-A (protein) Mannan-binding lectin serine protease 2 (protein)
Unique branched monosaccharides	BMA, NAG

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5JPN \| pdb_00005jpn	Download File View File

Structure of human complement C4 rebuilt using iMDFF

Croll, T.I., Andersen, G.R.

(2016) Acta Crystallogr D Struct Biol 72: 1006-1016

Released	2016-08-10
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Homo sapiens
Macromolecule	Complement C4-A (protein)
Unique Ligands	A2G, PBM
Unique branched monosaccharides	BMA, MAN, NAG

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5JTW \| pdb_00005jtw	Download File View File

Crystal structure of complement C4b re-refined using iMDFF

Croll, T.I., Andersen, G.R.

(2016) Acta Crystallogr D Struct Biol 72: 1006-1016

Released	2016-08-10
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	Complement C4-A (protein)
Unique Ligands	NAG

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5KQV \| pdb_00005kqv	Download File View File

Insulin receptor ectodomain construct comprising domains L1,CR,L2, FnIII-1 and alphaCT peptide in complex with bovine insulin and FAB 83-14 (REVISED STRUCTURE)

Lawrence, M.C., Smith, B.J., Croll, T.I.

(2013) Nature 493: 241-245

Released	2017-07-19
Method	X-RAY DIFFRACTION 4.4 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Insulin (protein) Insulin receptor,Insulin receptor (protein) MONOCLONAL ANTIBODY FAB 83-14 - HEAVY CHAIN (protein) MONOCLONAL ANTIBODY FAB 83-14 - LIGHT CHAIN (protein)
Unique branched monosaccharides	FUC, NAG

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5KSD \| pdb_00005ksd	Download File View File

Crystal Structure of a Plasma Membrane Proton Pump

Croll, T., Pedersen, B.P., Nissen, P.

(2017) Front Physiol 8: 202-202

Released	2016-08-10
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Arabidopsis thaliana
Macromolecule	ATPase 2, plasma membrane-type (protein)
Unique Ligands	ACP, K, LMT, MG

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5TEB \| pdb_00005teb	Download File View File

Crystal Structure of the TIR domain from the Arabidopsis Thaliana disease resistance protein RPP1

Bentham, A.R., Zhang, X., Croll, T., Williams, S., Kobe, B.

(2017) Proc Natl Acad Sci U S A 114: E2046-E2052

Released	2017-02-01
Method	X-RAY DIFFRACTION 2.796 Å
Organisms	Arabidopsis thaliana
Macromolecule	Recognition of Peronospora parasitica 1 (protein)

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5TEC \| pdb_00005tec	Download File View File

Crystal structure of the TIR domain from the Arabidopsis thaliana NLR protein SNC1

Zhang, X., Bentham, A., Ve, T., Williams, S.J., Kobe, B.

(2017) Proc Natl Acad Sci U S A 114: E2046-E2052

Released	2017-02-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Arabidopsis thaliana
Macromolecule	Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 (protein)

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6EYC \| pdb_00006eyc	Download File View File

Re-refinement of the MCM2-7 double hexamer using ISOLDE

Croll, T.I.

(2018) Acta Crystallogr D Struct Biol 74: 519-530

Released	2018-06-20
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 6
Unique Ligands	ADP, ZN

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6I2M \| pdb_00006i2m	Download File View File

Crystal structure of vaccinia virus protein A55 BTB-Back domain in complex with human Cullin-3 N-terminus

Gao, G., Graham, S.C.

(2019) J Biological Chem 294: 6416-6429

Released	2019-01-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Vaccinia virus WR
Macromolecule	Cullin-3 (protein) Kelch repeat and BTB domain-containing protein A55 (protein)

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6OGD \| pdb_00006ogd	Download File View File

Cryo-EM structure of YenTcA in its prepore state

Piper, S.J., Brillault, L., Box, J.K., Landsberg, M.J.

(2019) Nat Commun 10: 1952-1952

Released	2019-05-08
Method	ELECTRON MICROSCOPY 4.4 Å
Organisms	Yersinia entomophaga
Macromolecule	Chitinase 2 (protein) Toxin subunit YenA1 (protein) Toxin subunit YenA2 (protein)

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6VJA \| pdb_00006vja	Download File View File

Structure of CD20 in complex with rituximab Fab

Rohou, A., Croll, T.I.

(2020) Science 367: 1224-1230

Released	2020-02-26
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Homo sapiens
Macromolecule	B-lymphocyte antigen CD20 (protein) Rituximab Fab heavy chain (protein) Rituximab Fab light chain (protein)
Unique Ligands	Y01

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6VWG \| pdb_00006vwg	Download File View File

Head region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

Xu, Y., Kirk, N.S., Lawrence, M.C., Croll, T.I.

(2020) Structure 28: 786-798.e6

Released	2020-05-13
Method	ELECTRON MICROSCOPY 3.21 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Insulin-like growth factor II (protein) Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain (protein)
Unique Ligands	NAG

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6VWH \| pdb_00006vwh	Download File View File

Leg region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

Xu, Y., Kirk, N.S., Lawrence, M.C., Croll, T.I.

(2020) Structure 28: 786-798.e6

Released	2020-05-13
Method	ELECTRON MICROSCOPY 4.26 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain (protein)

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6VWI \| pdb_00006vwi	Download File View File

Head region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

Xu, Y., Kirk, N.S., Lawrence, M.C., Croll, T.I.

(2020) Structure 28: 786-798.e6

Released	2020-05-13
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Insulin-like growth factor II (protein) Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain (protein)
Unique Ligands	NAG

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6VWJ \| pdb_00006vwj	Download File View File

Leg region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II

Xu, Y., Kirk, N.S., Lawrence, M.C., Croll, T.I.

(2020) Structure 28: 786-798.e6

Released	2020-05-13
Method	ELECTRON MICROSCOPY 4.21 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain (protein)

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6ZHX \| pdb_00006zhx	Download File View File

Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: nucleosome class.

Bacic, L., Gaullier, G., Croll, T.I., Deindl, S.

(2020) Cell Rep 33: 108529-108529

Released	2020-12-23
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Homo sapiens Xenopus laevis synthetic construct
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2

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6ZHY \| pdb_00006zhy	Download File View File

Cryo-EM structure of the regulatory linker of ALC1 bound to the nucleosome's acidic patch: hexasome class.

Bacic, L., Gaullier, G., Deindl, S.

(2020) Cell Rep 33: 108529-108529

Released	2020-12-23
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens Xenopus laevis synthetic construct
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2

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7BBM \| pdb_00007bbm	Download File View File

Mutant nitrobindin M75L/H76L/Q96C/M148L (NB4H) from Arabidopsis thaliana with cofactor MnPPIX

Minges, A., Sauer, D.F., Wittwer, M., Markel, U., Spiertz, M., Schiffels, J., Davari, M.D., Okuda, J., Schwaneberg, U., Groth, G.

(2021) Catal Sci Technol

Released	2021-05-26
Method	X-RAY DIFFRACTION 1.14 Å
Organisms	Arabidopsis thaliana
Macromolecule	UPF0678 fatty acid-binding protein-like protein At1g79260 (protein)
Unique Ligands	EDO, MNH

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7BEQ \| pdb_00007beq	Download File View File

MicroED structure of the MyD88 TIR domain higher-order assembly

Clabbers, M.T.B., Holmes, S., Muusse, T.W., Vajjhala, P., Thygesen, S.J., Malde, A.K., Hunter, D.J.B., Croll, T.I., Nanson, J.D., Rahaman, M.H., Aquila, A., Hunter, M.S., Liang, M., Yoon, C.H., Zhao, J., Zatsepin, N.A., Abbey, B., Sierecki, E., Gambin, Y., Darmanin, C., Kobe, B., Xu, H., Ve, T.

(2021) Nat Commun 12: 2578-2578

Released	2021-03-10
Method	ELECTRON CRYSTALLOGRAPHY 3 Å
Organisms	Homo sapiens
Macromolecule	Myeloid differentiation primary response protein MyD88 (protein)

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7BER \| pdb_00007ber	Download File View File

SFX structure of the MyD88 TIR domain higher-order assembly (solved, rebuilt and refined using an identical protocol to the MicroED structure of the MyD88 TIR domain higher-order assembly)

(2021) Nat Commun 12: 2578-2578

Released	2021-03-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Myeloid differentiation primary response protein MyD88 (protein)

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7BJ3 \| pdb_00007bj3	Download File View File

ScpA from Streptococcus pyogenes, S512A active site mutant

Kagawa, T.F., O'Connell, M.R., Cooney, J.C.

(2021) Comput Struct Biotechnol J 19: 2356-2365

Released	2021-05-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Streptococcus pyogenes
Macromolecule	C5a peptidase (protein)
Unique Ligands	CA, EPE, MLA, NA, SO4

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7DW9 \| pdb_00007dw9	Download File View File

Cryo-EM structure of human V2 vasopressin receptor in complex with an Gs protein

Zhou, F., Jiang, Y.

(2021) Cell Res 31: 929-931

Released	2021-07-21
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Bos taurus Homo sapiens Rattus norvegicus synthetic construct
Macromolecule	Unique protein chains: 7
Unique Ligands	CLR

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7EZH \| pdb_00007ezh	Download File View File

Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gi complex

Liu, Q.F., Yang, D.H., Zhuang, Y.W., Croll, T.I., Cai, X.Q., Duan, J., Dai, A.T., Yin, W.C., Ye, C.Y., Zhou, F.L., Wu, B.L., Zhao, Q., Xu, H.E., Wang, M.W., Jiang, Y.

(2021) Nat Chem Biol 17: 1238-1244

Released	2021-08-25
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Unique protein chains: 6

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7EZK \| pdb_00007ezk	Download File View File

Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gs complex

Liu, Q.F., Yang, D.H., Zhuang, Y.W., Croll, T.I., Cai, X.Q., Duan, J., Dai, A.T., Yin, W.C., Ye, C.Y., Zhou, F.L., Wu, B.L., Zhao, Q., Xu, H.E., Wang, M.W., Jiang, Y.

(2021) Nat Chem Biol 17: 1238-1244

Released	2021-08-25
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens
Macromolecule	Chimera of Guanine nucleotide-binding protein G(i) subunit alpha-1 and Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Cholecystokinin receptor type A (protein) Cholecystokinin-8 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein)

1 to 25 of 804 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

4ZXB | pdb_00004zxb

5JPM | pdb_00005jpm

5JPN | pdb_00005jpn

5JTW | pdb_00005jtw

5KQV | pdb_00005kqv

5KSD | pdb_00005ksd

5TEB | pdb_00005teb

5TEC | pdb_00005tec

6EYC | pdb_00006eyc

6I2M | pdb_00006i2m

6OGD | pdb_00006ogd

6VJA | pdb_00006vja

6VWG | pdb_00006vwg

6VWH | pdb_00006vwh

6VWI | pdb_00006vwi

6VWJ | pdb_00006vwj

6ZHX | pdb_00006zhx

6ZHY | pdb_00006zhy

7BBM | pdb_00007bbm

7BEQ | pdb_00007beq

7BER | pdb_00007ber

7BJ3 | pdb_00007bj3

7DW9 | pdb_00007dw9

7EZH | pdb_00007ezh

7EZK | pdb_00007ezk