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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Esipov, R.S."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Escherichia coli (5)
	Mycobacterium tuberculosis (5)
	Thermus thermophilus (4)
	Escherichia coli K-12 (2)
	Escherichia coli O139:H28 str. E24377A (1)
	Mycobacterium tuberculosis BT1 (1)
	Thermus sp. (1)
	Thermus sp. 2.9 (1)

Taxonomy

Bacteria (20)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.5 - 2.0 (7)
	2.0 - 2.5 (8)
	2.5 - 3.0 (4)

Release Date

	2010 - 2014 (8)
	2015 - 2019 (5)
	2020 - 2024 (7)

Enzyme Classification Name

	Transferases (18)
	Lyases (1)

Symmetry Type

	Dihedral (12)
	Cyclic (7)
	Asymmetric (1)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (15)
	All alpha proteins (2)
	Alpha and beta proteins (a+b) (2)
	Artifacts (2)

AllSelected

1 to 20 of 20 Structures

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3LCJ \| pdb_00003lcj	Download File View File

Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis complexed with CoA

Timofeev, V.I., Smirnova, E.A., Chupova, L.A., Esipov, R.S., Kuranova, I.P.

(2010) Crystallogr Rep 55: 1050-1059

Released	2010-07-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Phosphopantetheine adenylyltransferase (protein)
Unique Ligands	COA

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3RBA \| pdb_00003rba	Download File View File

Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis complexed with DPCoA

Timofeev, V.I., Smirnova, E.A., Chupova, L.A., Esipov, R.S., Kuranova, I.P.

(2012) Crystallogr Rep 57: 96

Released	2012-04-04
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Phosphopantetheine adenylyltransferase (protein)
Unique Ligands	COD

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3RFF \| pdb_00003rff	Download File View File

Phosphopantetheine adenylyltransferase from Mycobacterium Tuberculosis (1.76 A resolution)

Timofeev, V.I., Smirnova, E.A., Chupova, L.A., Esipov, R.S., Kuranova, I.P.

(2012) Crystallogr Rep 57: 96

Released	2012-04-11
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Phosphopantetheine adenylyltransferase (protein)

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3RHS \| pdb_00003rhs	Download File View File

Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis complexed with CoA

Timofeev, V.I., Smirnova, E.A., Chupova, L.A., Esipov, R.S., Kuranova, I.P.

(2012) Crystallogr Rep 57: 97

Released	2012-04-11
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Phosphopantetheine adenylyltransferase (protein)
Unique Ligands	COA

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4EAD \| pdb_00004ead	Download File View File

Thymidine phosphorylase from E.coli with 3'-azido-2'-fluoro-dideoxyuridine

Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.

To be published

Released	2013-03-27
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Thymidine phosphorylase (protein)
Unique Ligands	0NP, GOL, SO4

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4EAF \| pdb_00004eaf	Download File View File

Thymidine phosphorylase from E.coli

Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.

To be published

Released	2013-03-27
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Escherichia coli K-12
Macromolecule	Thymidine phosphorylase (protein)
Unique Ligands	GOL, SO4

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4R0N \| pdb_00004r0n	Download File View File

Hexagonal form of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis

Timofeev, V.I., Smirnova, E.A., Chupova, L.A., Esipov, R.S., Kuranova, I.P.

To be published

Released	2014-08-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis BT1
Macromolecule	Phosphopantetheine adenylyltransferase (protein)
Unique Ligands	SO4

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4RJ2 \| pdb_00004rj2	Download File View File

Crystal structure of E.coli purine nucleoside phosphorylase at 0.99 A resolution

Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.

To be published

Released	2014-12-03
Method	X-RAY DIFFRACTION 0.99 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	GOL

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4S2U \| pdb_00004s2u	Download File View File

Crystal structure of the Phosphorybosylpyrophosphate synthetase from E. Coli

Timofeev, V.I., Abramchik, Y.A., Muravieva, T.I., Iaroslavtceva, A.K., Stepanenko, V.N., Zhukhlistova, N.E., Esipov, R.S., Kuranova, I.P.

To be published

Released	2016-01-27
Method	X-RAY DIFFRACTION 2.71 Å
Organisms	Escherichia coli
Macromolecule	Ribose-phosphate pyrophosphokinase (protein)
Unique Ligands	MG

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5I3C \| pdb_00005i3c	Download File View File

Crystal structure of E.coli purine nucleoside phosphorylase with acycloguanosine

Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.

(2018) Acta Crystallogr F Struct Biol Commun 74: 402-409

Released	2017-02-22
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Escherichia coli O139:H28 str. E24377A
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	AC2, SO4

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5IU6 \| pdb_00005iu6	Download File View File

Crystal structure of E.coli purine nucleoside phosphorylase with 7-deazahypoxanthine

Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.

(2018) Acta Crystallogr F Struct Biol Commun 74: 355-362

Released	2017-04-05
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	7HX, SO4

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5T3O \| pdb_00005t3o	Download File View File

Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus

Timofeev, V.I., Sinitsyna, E.V., Abramchik, Y.A., Kostromina, M.A., Esipov, R.S., Kuranova, I.P.

(2017) Acta Crystallogr F Struct Biol Commun 73: 369-375

Released	2017-06-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermus thermophilus
Macromolecule	Ribose-phosphate pyrophosphokinase (protein)
Unique Ligands	ADP, SO4

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6FSP \| pdb_00006fsp	Download File View File

Crystal structure of APRT from Thermus thermophilus

Timofeev, V.I., Sinitsyna, E.V., Kostromina, M.A., Muravieva, T.I., Makarov, D.A., Mikheeva, O.O., Kuranova, I.P., Esipov, R.S.

To be published

Released	2019-03-20
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Thermus thermophilus
Macromolecule	PRPP-binding protein, adenine/guanine phosphoribosyltransferase (protein)

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6TK9 \| pdb_00006tk9	Download File View File

Purine-nucleoside phosphorylase from Thermus thermophilus

Timofeev, V.I., Abramchik, Y.A., Kostromina, M.A., Tuzova, E.S., Esipov, R.S., Kuranova, I.P.

To be published

Released	2020-12-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermus thermophilus
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	PO4

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6YJH \| pdb_00006yjh	Download File View File

Crystal structure of Imidazole Glycerol Phosphate Dehydratase from Mycobacterium tuberculosis at 1.61 A resolution

Timofeev, V.I., Abramchik, Y.A., Skvortsov, T.A., Azhikina, T.L., Muravieva, T.I., Kostromina, M.A., Esipov, R.S., Kuranova, I.P.

To be published

Released	2021-04-14
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Imidazoleglycerol-phosphate dehydratase (protein)
Unique Ligands	MN

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6ZNX \| pdb_00006znx	Download File View File

Ribokinase from Thermus Species

Timofeev, V.I., Abramchik, Y.A., Tuzova, E.S., Esipova, L.V., Mikheeva, O.O., Kostromina, M.A., Kuranova, I.P., Esipov, R.S.

To be published

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermus sp. 2.9
Macromolecule	Ribokinase (protein)
Unique Ligands	ADP

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7PN0 \| pdb_00007pn0	Download File View File

Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group

Timofeev, V.I., Abramchik, Y.A., Kostromina, M.A., Esipov, R.S., Kuranova, I.P.

To be published

Released	2021-09-29
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thermus thermophilus
Macromolecule	Ribose-phosphate pyrophosphokinase (protein)
Unique Ligands	ADP, SO4

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8CAG \| pdb_00008cag	Download File View File

Hypoxanthine-guanine phosphoribosyltransferase from E. coli

Timofeev, V.I., Shevtsov, M.B., Abramchik, Y.A., Kostromina, M.A., Zayats, E.A., Kuranova, I.P., Esipov, R.S.

To be published

Released	2023-02-01
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Hypoxanthine phosphoribosyltransferase (protein)
Unique Ligands	MG

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8CQX \| pdb_00008cqx	Download File View File

Ribokinase from T.sp mutant A92G

Timofeev, V.I., Shevtsov, M.B., Abramchik, Y.A., Kostromina, M.A., Zayats, E.A., Kuranova, I.P., Esipov, R.S.

To be published

Released	2023-04-05
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Thermus sp.
Macromolecule	Ribokinase (protein)
Unique Ligands	ADP, MG

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9K8M \| pdb_00009k8m	Download File View File

Hypoxanthine-guanine phosphoribosyltransferase from E. coli with HEPES

Timofeev, V.I., Shevtsov, M.B., Abramchik, Y.A., Kostromina, M.A., Zayats, E.A., Kuranova, I.P., Esipov, R.S.

To be published

Released	2024-11-06
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Escherichia coli
Macromolecule	Hypoxanthine phosphoribosyltransferase (protein)
Unique Ligands	EPE

1 to 20 of 20 Structures

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3LCJ | pdb_00003lcj

Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis complexed with CoA

3RBA | pdb_00003rba

Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis complexed with DPCoA

3RFF | pdb_00003rff

Phosphopantetheine adenylyltransferase from Mycobacterium Tuberculosis (1.76 A resolution)

3RHS | pdb_00003rhs

Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis complexed with CoA

4EAD | pdb_00004ead

Thymidine phosphorylase from E.coli with 3'-azido-2'-fluoro-dideoxyuridine

4EAF | pdb_00004eaf

Thymidine phosphorylase from E.coli

4R0N | pdb_00004r0n

Hexagonal form of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis

4RJ2 | pdb_00004rj2

Crystal structure of E.coli purine nucleoside phosphorylase at 0.99 A resolution

4S2U | pdb_00004s2u

Crystal structure of the Phosphorybosylpyrophosphate synthetase from E. Coli

5I3C | pdb_00005i3c

Crystal structure of E.coli purine nucleoside phosphorylase with acycloguanosine

5IU6 | pdb_00005iu6

Crystal structure of E.coli purine nucleoside phosphorylase with 7-deazahypoxanthine

5T3O | pdb_00005t3o

Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus

6FSP | pdb_00006fsp

Crystal structure of APRT from Thermus thermophilus

6TK9 | pdb_00006tk9

Purine-nucleoside phosphorylase from Thermus thermophilus

6YJH | pdb_00006yjh

Crystal structure of Imidazole Glycerol Phosphate Dehydratase from Mycobacterium tuberculosis at 1.61 A resolution

6ZNX | pdb_00006znx

Ribokinase from Thermus Species

7PN0 | pdb_00007pn0

Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group

8CAG | pdb_00008cag

Hypoxanthine-guanine phosphoribosyltransferase from E. coli

8CQX | pdb_00008cqx

Ribokinase from T.sp mutant A92G

9K8M | pdb_00009k8m

Hypoxanthine-guanine phosphoribosyltransferase from E. coli with HEPES

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3LCJ | pdb_00003lcj

3RBA | pdb_00003rba

3RFF | pdb_00003rff

3RHS | pdb_00003rhs

4EAD | pdb_00004ead

4EAF | pdb_00004eaf

4R0N | pdb_00004r0n

4RJ2 | pdb_00004rj2

4S2U | pdb_00004s2u

5I3C | pdb_00005i3c

5IU6 | pdb_00005iu6

5T3O | pdb_00005t3o

6FSP | pdb_00006fsp

6TK9 | pdb_00006tk9

6YJH | pdb_00006yjh

6ZNX | pdb_00006znx

7PN0 | pdb_00007pn0

8CAG | pdb_00008cag

8CQX | pdb_00008cqx

9K8M | pdb_00009k8m