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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Gilbert, H.J."

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Search Summary

This query matches 314 Structures.

Refinements

Structure Determination Methodology

experimental (314)

Scientific Name of Source Organism

	Bacteroides thetaiotaomicron VPI-5482 (39)
	Cellvibrio japonicus (38)
	Acetivibrio thermocellus (35)
	Bacteroides thetaiotaomicron (22)
	Cellvibrio mixtus (13)
	Piromyces sp. 'equi (12)
	Ruminococcus flavefaciens FD-1 (11)
	Bacillus subtilis (7)
	Rhodothermus marinus (7)
	Ruminococcus flavefaciens (7)

More...

Taxonomy

	Bacteria (290)
	Eukaryota (24)

Experimental Method

	X-RAY DIFFRACTION (298)
	SOLUTION NMR (16)

Polymer Entity Type

Protein (314)

Refinement Resolution (Å)

	0.5 - 1.0 (3)
	1.0 - 1.5 (62)
	1.5 - 2.0 (139)
	2.0 - 2.5 (62)
	2.5 - 3.0 (28)
	3.0 - 3.5 (4)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (64)
	2005 - 2009 (86)
	2010 - 2014 (65)
	2015 - 2019 (95)

Enzyme Classification Name

	Hydrolases (169)
	Transferases (16)

Membrane Protein Annotation

OPM (2)

Symmetry Type

	Asymmetric (277)
	Cyclic (31)
	Dihedral (7)

SCOP Classification

	All beta proteins (79)
	Alpha and beta proteins (a/b) (78)
	Artifacts (37)
	All alpha proteins (17)
	Alpha and beta proteins (a+b) (5)
	Small proteins (4)

AllSelected

1 to 25 of 314 Structures

Page 1 of 13

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1CLX \| pdb_00001clx	Download File View File

CATALYTIC CORE OF XYLANASE A

Harris, G.W., Jenkins, J.A., Connerton, I., Pickersgill, R.W.

(1996) Acta Crystallogr D Biol Crystallogr 52: 393-401

Released	1996-06-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Cellvibrio japonicus
Macromolecule	XYLANASE A (protein)
Unique Ligands	CA

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1DYO \| pdb_00001dyo	Download File View File

Xylan-Binding Domain from CBM 22, formally x6b domain

Davies, G.J., Charnock, S.J., Gilbert, H.J., Fontes, C.M.G.A.

(2000) Biochemistry 39: 5013

Released	2000-07-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Acetivibrio thermocellus
Macromolecule	ENDO-1,4-BETA-XYLANASE Y (protein)
Unique Ligands	CA

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1E0V \| pdb_00001e0v	Download File View File

Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A

Ducros, V., Charnock, S.J., Derewenda, U., Derewenda, Z.S., Dauter, Z., Dupont, C., Shareck, F., Morosoli, R., Kluepfel, D., Davies, G.J.

(2000) J Biological Chem 275: 23020

Released	2001-04-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces lividans
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)
Unique branched monosaccharides	BGC, G2F

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1E0W \| pdb_00001e0w	Download File View File

Xylanase 10A from Sreptomyces lividans. native structure at 1.2 angstrom resolution

Ducros, V., Charnock, S.J., Derewenda, U., Derewenda, Z.S., Dauter, Z., Dupont, C., Shareck, F., Morosoli, R., Kluepfel, D., Davies, G.J.

(2000) J Biological Chem 275: 23020

Released	2001-04-05
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Streptomyces lividans
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)

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1E5B \| pdb_00001e5b	Download File View File

Internal xylan binding domain from C. fimi Xyn10A, R262G mutant

Simpson, P.J., Hefang, X., Bolam, D.N., Gilbert, H.J., Williamson, M.P.

(2000) J Biological Chem 275: 41137

Released	2001-05-25
Method	SOLUTION NMR
Organisms	Cellulomonas fimi
Macromolecule	XYLANASE D (protein)

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1E5C \| pdb_00001e5c	Download File View File

Internal xylan binding domain from C. fimi Xyn10A, R262G mutant

Simpson, P.J., Hefang, X., Bolam, D.N., Gilbert, H.J., Williamson, M.P.

(2000) J Biological Chem 275: 41137

Released	2001-05-25
Method	SOLUTION NMR
Organisms	Cellulomonas fimi
Macromolecule	XYLANASE D (protein)

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1E5N \| pdb_00001e5n	Download File View File

E246C mutant of P fluorescens subsp. cellulosa xylanase A in complex with xylopentaose

Lo Leggio, L., Jenkins, J.A., Harris, G.W., Pickersgill, R.W.

(2000) Proteins 41: 362-373

Released	2000-12-08
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Pseudomonas fluorescens
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)
Unique Ligands	CA
Unique branched monosaccharides	XYP

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1E8P \| pdb_00001e8p	Download File View File

Characterisation of the cellulose docking domain from Piromyces equi

Raghothama, S., Eberhardt, R.Y., White, P., Hazlewood, G.P., Gilbert, H.J., Simpson, P.J., Williamson, M.P.

(2001) Nat Struct Biol 8: 775-778

Released	2001-09-07
Method	SOLUTION NMR
Organisms	Piromyces sp. 'equi
Macromolecule	Endoglucanase 45A (protein)

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1E8Q \| pdb_00001e8q	Download File View File

Characterisation of the cellulose docking domain from Piromyces equi

Raghothama, S., Eberhardt, R.Y., White, P., Hazlewood, G.P., Gilbert, H.J., Simpson, P.J., Williamson, M.P.

(2001) Nat Struct Biol 8: 775-778

Released	2001-09-07
Method	SOLUTION NMR
Organisms	Piromyces sp. 'equi
Macromolecule	Endoglucanase 45A (protein)

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1E8R \| pdb_00001e8r	Download File View File

SOLUTION STRUCTURE OF TYPE X CBD

Raghothama, S., Simpson, P.J., Gilbert, H.J., Williamson, M.P.

(2000) Biochemistry 39: 978

Released	2000-10-03
Method	SOLUTION NMR
Organisms	Pseudomonas fluorescens
Macromolecule	ENDO-1,4-BETA-XYLANASE (protein)

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1GMM \| pdb_00001gmm	Download File View File

Carbohydrate binding module CBM6 from xylanase U Clostridium thermocellum

Czjzek, M., Mosbah, A., Bolam, D., Allouch, J., Zamboni, V., Henrissat, B., Gilbert, H.J.

(2001) J Biological Chem 276: 48580

Released	2001-11-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Acetivibrio thermocellus
Macromolecule	CBM6 (protein)
Unique Ligands	CA, NA, SO4

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1GNY \| pdb_00001gny	Download File View File

xylan-binding module CBM15

Szabo, S., Jamal, S., Xie, H., Charnock, S.J., Bolam, D.N., Gilbert, H.J., Davies, G.J.

(2001) J Biological Chem 276: 49061

Released	2001-11-29
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Cellvibrio japonicus
Macromolecule	XYLANASE 10C (protein)
Unique Ligands	NA
Unique branched monosaccharides	XYP

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1GQI \| pdb_00001gqi	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-GLUCURONIDASE (protein)
Unique Ligands	CO, EDO, MG

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1GQJ \| pdb_00001gqj	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with xylobiose

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-D-GLUCURONIDASE (protein)
Unique Ligands	CO, EDO
Unique branched monosaccharides	XYP

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1GQK \| pdb_00001gqk	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-D-GLUCURONIDASE (protein)
Unique Ligands	BDP, CO, EDO

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1GQL \| pdb_00001gql	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid and xylotriose

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-D-GLUCURONIDASE (protein)
Unique Ligands	BDP, CO, EDO
Unique branched monosaccharides	XYP

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1GVY \| pdb_00001gvy	Download File View File

Substrate distorsion by beta-mannanase from Pseudomonas cellulosa

Ducros, V., Zechel, D.L., Gilbert, H.J., Szabo, L., Withers, S.G., Davies, G.J.

(2002) Angew Chem Int Ed Engl 41: 2824

Released	2002-09-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Cellvibrio japonicus
Macromolecule	MANNAN ENDO-1,4-BETA-MANNOSIDASE (protein)
Unique Ligands	NA, NIN, TRS, ZN
Unique branched monosaccharides	BMA, MBF

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1GW1 \| pdb_00001gw1	Download File View File

Substrate distortion by beta-mannanase from Pseudomonas cellulosa

Ducros, V., Zechel, D.L., Gilbert, H.J., Szabo, L., Withers, S.G., Davies, G.J.

(2002) Angew Chem Int Ed Engl 41: 2824

Released	2002-09-05
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Cellvibrio japonicus
Macromolecule	MANNAN ENDO-1,4-BETA-MANNOSIDASE (protein)
Unique Ligands	NA, NIN, TRS, ZN
Unique branched monosaccharides	BMA, MAF, MBF

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1GYD \| pdb_00001gyd	Download File View File

Structure of Cellvibrio cellulosa alpha-L-arabinanase

Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, E.J., Gilbert, H.J., Davies, G.J.

(2002) Nat Struct Biol 9: 665-668

Released	2002-08-23
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Cellvibrio japonicus
Macromolecule	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A (protein)

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1GYE \| pdb_00001gye	Download File View File

Structure of Cellvibrio cellulosa alpha-L-arabinanase complexed with Arabinohexaose

Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, E.J., Gilbert, H.J., Davies, G.J.

(2002) Nat Struct Biol 9: 665-668

Released	2002-08-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Cellvibrio japonicus
Macromolecule	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A (protein)
Unique Ligands	CL
Unique branched monosaccharides	AHR

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1GYH \| pdb_00001gyh	Download File View File

Structure of D158A Cellvibrio cellulosa alpha-L-arabinanase mutant

Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, E.J., Gilbert, H.J., Davies, G.J.

(2002) Nat Struct Biol 9: 665

Released	2002-08-23
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Cellvibrio japonicus
Macromolecule	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A (protein)
Unique Ligands	CL