RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Gonzalez, A."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 170 Structures.

Refinements

Structure Determination Methodology

experimental (170)

Scientific Name of Source Organism

	Homo sapiens (51)
	Escherichia coli (19)
	Gallus gallus (18)
	Comamonas testosteroni (13)
	Thaumatococcus daniellii (9)
	Primolicivirus Pf1 (6)
	Streptococcus pneumoniae R6 (6)
	Staphylococcus phage PVL (5)
	Sporosarcina pasteurii (4)
	Human immunodeficiency virus type 1 (Z2/CDC-Z34 ISOLATE) (3)

More...

Taxonomy

	Eukaryota (89)
	Bacteria (61)
	Monodnaviria (11)
	Duplodnaviria (5)
	Riboviria (4)
	other sequences (2)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (153)
	FIBER DIFFRACTION (11)
	ELECTRON MICROSCOPY (3)
	SOLUTION NMR (2)
	ELECTRON CRYSTALLOGRAPHY (1)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (169)
	DNA (3)

Refinement Resolution (Å)

	0.5 - 1.0 (4)
	1.0 - 1.5 (35)
	1.5 - 2.0 (68)
	2.0 - 2.5 (30)
	2.5 - 3.0 (17)
	3.0 - 3.5 (12)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

	1995 - 1999 (11)
	2000 - 2004 (29)
	2005 - 2009 (13)
	2010 - 2014 (29)
	2015 - 2019 (59)
	2020 - 2024 (19)
	2025 - 2029 (10)

Enzyme Classification Name

	Isomerases (50)
	Hydrolases (42)
	Lyases (4)
	Ligases (3)
	Oxidoreductases (2)
	Translocases (1)

Membrane Protein Annotation

	MemProtMD (9)
	OPM (5)
	PDBTM (2)

Symmetry Type

	Asymmetric (112)
	Cyclic (45)
	Helical (11)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a+b) (39)
	All beta proteins (56)
	Alpha and beta proteins (a/b) (14)
	All alpha proteins (11)
	Membrane and cell surface proteins and peptides (6)
	Coiled coil proteins (10)
	Artifacts (6)
	Small proteins (2)

AllSelected

1 to 25 of 170 Structures

Page 1 of 7

Sort by

Explore in 3D

1B00 \| pdb_00001b00	Download File View File

PHOB RECEIVER DOMAIN FROM ESCHERICHIA COLI

Sola, M., Gomis-Ruth, F.X., Serrano, L., Gonzalez, A., Coll, M.

(1999) J Mol Biology 285: 675-687

Released	1999-11-19
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Escherichia coli
Macromolecule	PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB (protein)

Explore in 3D

1B01 \| pdb_00001b01	Download File View File

TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX

Gomis-Rueth, F.X., Sola, M., Acebo, P., Parraga, A., Guasch, A., Eritja, R., Gonzalez, A., Espinosa, M., del Solar, G., Coll, M.

(1998) EMBO J 17: 7404-7415

Released	1999-11-19
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Streptococcus agalactiae
Macromolecule	TRANSCRIPTIONAL REPRESSOR COPG (protein) DNA (5'-D(CPCPCPGPTPGPCPAPCPTPCPAPAPTPGPCPAPAPT)-3') (nucleic acid) DNA (5'-D(GPAPTPTPGPCPAPTPTPGPAPGPTPGPCPAPCPGPG)-3') (nucleic acid)

Explore in 3D

1B7V \| pdb_00001b7v	Download File View File

Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution

Gonzalez, A., Benini, S., Rypniewski, W.R., Wilson, K.S., Ciurli, S.

(2000) Biochemistry 39: 13115-13126

Released	2000-03-27
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Sporosarcina pasteurii
Macromolecule	PROTEIN (CYTOCHROME C-553) (protein)
Unique Ligands	HEC

Explore in 3D

1C75 \| pdb_00001c75	Download File View File

0.97 A "AB INITIO" CRYSTAL STRUCTURE OF CYTOCHROME C-553 FROM BACILLUS PASTEURII

Benini, S., Ciurli, S., Rypniewski, W.R., Wilson, K.S.

(2000) Biochemistry 39: 13115-13126

Released	2000-03-22
Method	X-RAY DIFFRACTION 0.97 Å
Organisms	Sporosarcina pasteurii
Macromolecule	CYTOCHROME C-553 (protein)
Unique Ligands	HEC

Explore in 3D

1DFX \| pdb_00001dfx	Download File View File

DESULFOFERRODOXIN FROM DESULFOVIBRIO DESULFURICANS, ATCC 27774

Coelho, A.V., Matias, P.M., Carrondo, M.A.

(1997) J Biol Inorg Chem 2: 680

Released	1998-10-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Desulfovibrio desulfuricans
Macromolecule	DESULFOFERRODOXIN (protein)
Unique Ligands	CA, FE

Explore in 3D

1E9R \| pdb_00001e9r	Download File View File

Bacterial conjugative coupling protein TrwBdeltaN70. Trigonal form in complex with sulphate.

Gomis-Rueth, F.X., Moncalian, G., Cabezon, E., de la Cruz, F., Coll, M.

(2001) Nature 409: 637

Released	2001-02-06
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	CONJUGAL TRANSFER PROTEIN TRWB (protein)
Unique Ligands	SO4

Explore in 3D

1E9S \| pdb_00001e9s	Download File View File

Bacterial conjugative coupling protein TrwBdeltaN70. Unbound monoclinic form.

Gomis-Rueth, F.X., Moncalian, G., Cabezon, E., de la Cruz, F., Coll, M.

(2001) Nature 409: 637

Released	2001-02-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	CONJUGAL TRANSFER PROTEIN TRWB (protein)

Explore in 3D

1EA4 \| pdb_00001ea4	Download File View File

TRANSCRIPTIONAL REPRESSOR COPG/22bp dsDNA COMPLEX

Gomis-Rueth, F.X., Costa, M., Sola, M., Acebo, P., Eritja, R., Espinosa, M., Solar, G.D., Coll, M.

(2001) J Mol Biology 310: 403

Released	2001-07-05
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Streptococcus agalactiae
Macromolecule	TRANSCRIPTIONAL REPRESSOR COPG (protein) DNA (5'-D(TPAPAPCPCPGPTPGP CPAPCPTPCPAPAPTPGPCPAPAPTPC)-3') (nucleic acid) DNA(5'-D(APGPAPTPTPGPCPAPTP TPGPAPGPTPGPCPAPCPGPGPTPT)-3') (nucleic acid)

Explore in 3D

1EA7 \| pdb_00001ea7	Download File View File

Sphericase

Almog, O., Gonzalez, A., Klein, D., Braun, S., Shoham, G.

(2003) J Mol Biology 332: 1071

Released	2002-07-04
Method	X-RAY DIFFRACTION 0.93 Å
Organisms	Lysinibacillus sphaericus
Macromolecule	SERINE PROTEASE (protein)
Unique Ligands	CA

Explore in 3D

1EU5 \| pdb_00001eu5	Download File View File

STRUCTURE OF E. COLI DUTPASE AT 1.45 A

Gonzalez, A., Larsson, G., Persson, R., Cedergren-Zeppezauer, E.

(2001) Acta Crystallogr D Biol Crystallogr 57: 767-774

Released	2000-05-03
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli
Macromolecule	DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (protein)
Unique Ligands	GOL

Explore in 3D

1EUW \| pdb_00001euw	Download File View File

ATOMIC RESOLUTION STRUCTURE OF E. COLI DUTPASE

Gonzalez, A., Cedergren, E., Larsson, G., Persson, R.

(2001) Acta Crystallogr D Biol Crystallogr 57: 767-774

Released	2000-05-03
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Escherichia coli
Macromolecule	DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (protein)
Unique Ligands	EMC, GOL

Explore in 3D

1GKI \| pdb_00001gki	Download File View File

Plasmid coupling protein TrwB in complex with ADP and Mg2+.

Gomis-Ruth, F.X., Moncalian, G., De La cruz, F., Coll, M.

(2001) Nature 409: 637

Released	2002-05-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli
Macromolecule	CONJUGAL TRANSFER PROTEIN TRWB (protein)
Unique Ligands	ADP, EPE, MG

Explore in 3D

1GL6 \| pdb_00001gl6	Download File View File

Plasmid coupling protein TrwB in complex with the non-hydrolysable GTP analogue GDPNP

Gomis-Ruth, F.X., Moncalian, G., De La cruz, F., Coll, M.

(2001) Nature 409: 637

Released	2002-05-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	ATPASE (protein)
Unique Ligands	CL, EPE, GNP

Explore in 3D

1GL7 \| pdb_00001gl7	Download File View File

Plasmid coupling protein TrwB in complex with the non-hydrolisable ATP-analogue ADPNP.

Gomis-Ruth, F.X., Moncalian, G., De La cruz, F., Coll, M.

(2001) Nature 409: 637

Released	2002-05-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli
Macromolecule	CONJUGAL TRANSFER PROTEIN TRWB (protein)
Unique Ligands	ANP, CL

Explore in 3D

1H21 \| pdb_00001h21	Download File View File

A novel iron centre in the split-Soret cytochrome c from Desulfovibrio desulfuricans ATCC 27774

Abreu, I.A., Lourenco, A.I., Xavier, A.V., Legall, J., Coelho, A.V., Matias, P.M., Pinto, D.M., Carrondo, M.A., Teixeira, M., Saraiva, L.M.

(2003) J Biol Inorg Chem 8: 360

Released	2003-02-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Desulfovibrio desulfuricans
Macromolecule	SPLIT-SORET CYTOCHROME C (protein)
Unique Ligands	HEC

Explore in 3D

1HGV \| pdb_00001hgv	Download File View File

Filamentous Bacteriophage PH75

Pederson, D.M., Welsh, L.C., Marvin, D.A., Sampson, M., Perham, R.N., Yu, M., Slater, M.R.

(2001) J Mol Biology 309: 401

Released	2001-06-01
Method	FIBER DIFFRACTION 2.4 Å
Organisms	Thermus phage PH75
Macromolecule	PH75 INOVIRUS MAJOR COAT PROTEIN (protein)

Explore in 3D

1HGZ \| pdb_00001hgz	Download File View File

Filamentous Bacteriophage PH75

Pederson, D.M., Welsh, L.C., Marvin, D.A., Sampson, M., Perham, R.N., Yu, M., Slater, M.R.

(2001) J Mol Biology 309: 401

Released	2001-06-01
Method	FIBER DIFFRACTION 2.4 Å
Organisms	Thermus phage PH75
Macromolecule	PH75 INOVIRUS MAJOR COAT PROTEIN (protein)

Explore in 3D

1HH0 \| pdb_00001hh0	Download File View File

Filamentous Bacteriophage PH75

Pederson, D.M., Welsh, L.C., Marvin, D.A., Sampson, M., Perham, R.N., Yu, M., Slater, M.R.

(2001) J Mol Biology 309: 401

Released	2001-06-01
Method	FIBER DIFFRACTION 2.4 Å
Organisms	Thermus phage PH75
Macromolecule	PH75 INOVIRUS MAJOR COAT PROTEIN (protein)

Explore in 3D

1HLQ \| pdb_00001hlq	Download File View File

CRYSTAL STRUCTURE OF RHODOFERAX FERMENTANS HIGH POTENTIAL IRON-SULFUR PROTEIN REFINED TO 1.45 A

Gonzalez, A., Ciurli, S., Benini, S.

(2003) Acta Crystallogr D Biol Crystallogr 59: 1582-1588

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Rhodoferax fermentans
Macromolecule	HIGH-POTENTIAL IRON-SULFUR PROTEIN (protein)
Unique Ligands	SF4, SO4