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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Hoffmann, T."

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Search Summary

This query matches 110 Structures.

Refinements

Structure Determination Methodology

experimental (110)

Scientific Name of Source Organism

	Homo sapiens (84)
	Thermochaetoides thermophila (9)
	Sus scrofa (6)
	synthetic construct (5)
	Geobacillus thermodenitrificans NG80-2 (3)
	Porphyromonas gingivalis W83 (3)
	Xenopus laevis (3)
	Bacillus subtilis (2)
	Saccharomyces cerevisiae (2)
	Mus musculus (1)

Taxonomy

	Eukaryota (102)
	Bacteria (8)
	other sequences (5)

Experimental Method

	X-RAY DIFFRACTION (91)
	ELECTRON MICROSCOPY (19)

Polymer Entity Type

	Protein (110)
	DNA (9)

Refinement Resolution (Å)

	1.0 - 1.5 (45)
	1.5 - 2.0 (27)
	2.0 - 2.5 (13)
	2.5 - 3.0 (10)
	3.0 - 3.5 (8)
	3.5 - 4.0 (3)
	> 4.5 (4)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (2)
	2005 - 2009 (7)
	2015 - 2019 (7)
	2020 - 2024 (93)

Enzyme Classification Name

	Hydrolases (13)
	Transferases (3)

Symmetry Type

	Cyclic (79)
	Asymmetric (31)
	Dihedral (7)

SCOP Classification

	All beta proteins (7)
	Alpha and beta proteins (a/b) (7)

AllSelected

1 to 25 of 110 Structures

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1AXT \| pdb_00001axt	Download File View File

IMMUNE VERSUS NATURAL SELECTION: ANTIBODY ALDOLASES WITH THE RATES OF NATURAL ENZYMES

Heine, A., Wilson, I.A.

(1997) Science 278: 2085-2092

Released	1998-10-28
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Mus musculus
Macromolecule	IMMUNOGLOBULIN IGG2A (protein)

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1ORV \| pdb_00001orv	Download File View File

Crystal Structure of Porcine Dipeptidyl Peptidase IV (CD26)

Engel, M., Hoffmann, T., Wagner, L., Wermann, M., Heiser, U., Kiefersauer, R., Huber, R., Bode, W., Demuth, H.U., Brandstetter, H.

(2003) Proc Natl Acad Sci U S A 100: 5063-5068

Released	2003-05-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	dipeptidyl peptidase IV (protein)
Unique Ligands	NAG, SO4
Unique branched monosaccharides	BMA, NAG

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1ORW \| pdb_00001orw	Download File View File

Crystal Structure of Porcine Dipeptidyl Peptidase IV (CD26) in Complex with a Peptidomimetic Inhibitor

Engel, M., Hoffmann, T., Wagner, L., Wermann, M., Heiser, U., Kiefersauer, R., Huber, R., Bode, W., Demuth, H.U., Brandstetter, H.

(2003) Proc Natl Acad Sci U S A 100: 5063-5068

Released	2003-05-06
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Sus scrofa
Macromolecule	dipeptidyl peptidase IV (protein)
Unique Ligands	NAG, P2Y, PHI, SO4
Unique branched monosaccharides	BMA, NAG

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2AJ8 \| pdb_00002aj8	Download File View File

Porcine dipeptidyl peptidase IV (CD26) in complex with 7-Benzyl-1,3-dimethyl-8-piperazin-1-yl-3,7-dihydro-purine-2,6-dione (BDPX)

Engel, M., Hoffmann, T., Manhart, S., Heiser, U., Chambre, S., Huber, R., Demuth, H.U., Bode, W.

(2006) J Mol Biology 355: 768-783

Released	2006-02-28
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Sus scrofa
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG, SC3, SO4
Unique branched monosaccharides	BMA, NAG

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2AJB \| pdb_00002ajb	Download File View File

Porcine dipeptidyl peptidase IV (CD26) in complex with the tripeptide tert-butyl-Gly-L-Pro-L-Ile (tBu-GPI)

Engel, M., Hoffmann, T., Manhart, S., Heiser, U., Chambre, S., Huber, R., Demuth, H.U., Bode, W.

(2006) J Mol Biology 355: 768-783

Released	2006-02-28
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Sus scrofa
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	0QG, NAG, SO4
Unique branched monosaccharides	BMA, NAG

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2AJC \| pdb_00002ajc	Download File View File

Porcine dipeptidyl peptidase IV (CD26) in complex with 4-(2-Aminoethyl)-benzene sulphonyl fluoride (AEBSF)

Engel, M., Hoffmann, T., Manhart, S., Heiser, U., Chambre, S., Huber, R., Demuth, H.U., Bode, W.

(2006) J Mol Biology 355: 768-783

Released	2006-02-28
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Sus scrofa
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	AES, NAG, SO4
Unique branched monosaccharides	BMA, NAG

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2AJD \| pdb_00002ajd	Download File View File

Porcine dipeptidyl peptidase IV (CD26) in complex with L-Pro-boro-L-Pro (boroPro)

Engel, M., Hoffmann, T., Manhart, S., Heiser, U., Chambre, S., Huber, R., Demuth, H.U., Bode, W.

(2006) J Mol Biology 355: 768-783

Released	2006-02-28
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Sus scrofa
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	BPR, NAG, SO4
Unique branched monosaccharides	BMA, NAG

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2EEP \| pdb_00002eep	Download File View File

Prolyl Tripeptidyl Aminopeptidase Complexed with an Inhibitor

Xu, Y., Nakajima, Y., Ito, K., Yoshimoto, T.

(2008) J Mol Biology 375: 708-719

Released	2008-02-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Porphyromonas gingivalis W83
Macromolecule	Dipeptidyl aminopeptidase IV, putative (protein)
Unique Ligands	AIO, SO4

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2Z3W \| pdb_00002z3w	Download File View File

Prolyl tripeptidyl aminopeptidase mutant E636A

Xu, Y., Nakajima, Y., Ito, K., Yoshimoto, T.

(2008) J Mol Biology 375: 708-719

Released	2008-02-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Porphyromonas gingivalis W83
Macromolecule	Dipeptidyl aminopeptidase IV (protein)
Unique Ligands	GOL, SO4

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2Z3Z \| pdb_00002z3z	Download File View File

Prolyl tripeptidyl aminopeptidase mutant E636A complexd with an inhibitor

Xu, Y., Nakajima, Y., Ito, K., Yoshimoto, T.

(2008) J Mol Biology 375: 708-719

Released	2008-02-19
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Porphyromonas gingivalis W83
Macromolecule	Dipeptidyl aminopeptidase IV (protein)
Unique Ligands	AIO, SO4

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5NXX \| pdb_00005nxx	Download File View File

Crystal structure of OpuAC from B. subtilis in complex with Arsenobetaine

Hofmann, T., Bremer, E., Schmitt, L., Smits, S.

(2018) Environ Microbiol 20: 305-323

Released	2018-03-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus subtilis
Macromolecule	Glycine betaine ABC transport system glycine betaine-binding protein OpuAC (protein)
Unique Ligands	3Q7

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5NXY \| pdb_00005nxy	Download File View File

Crystal structure of OpuAC from B. subtilis in complex with Arsenobetaine

Hofmann, T., Bremer, E., Schmitt, L., Smits, S.

(2018) Environ Microbiol 20: 305-323

Released	2018-03-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacillus subtilis
Macromolecule	Osmotically activated L-carnitine/choline ABC transporter substrate-binding protein OpuCC (protein)
Unique Ligands	1Y8, EDO

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6CVH \| pdb_00006cvh	Download File View File

Identification and biological evaluation of thiazole-based inverse agonists of RORgt

Spurlino, J., Milligan, C.

(2018) Bioorg Med Chem Lett 28: 1446-1455

Released	2018-04-25
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	Nuclear receptor ROR-gamma (protein)
Unique Ligands	FJG

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6QB5 \| pdb_00006qb5	Download File View File

Crystal structure of the N-terminal region of human cohesin subunit STAG1

Newman, J.A., Katis, V.L., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.

(2020) Life Sci Alliance 3:

Released	2019-02-06
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Homo sapiens
Macromolecule	Cohesin subunit SA-1 (protein)
Unique Ligands	NA

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6R7O \| pdb_00006r7o	Download File View File

Crystal structure of the central region of human cohesin subunit STAG1

Newman, J.A., katis, V.L., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.

(2020) Life Sci Alliance 3:

Released	2019-04-10
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	Cohesin subunit SA-1 (protein)

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6RRC \| pdb_00006rrc	Download File View File

Crystal structure of the N-terminal region of human cohesin subunit STAG1 in complex with RAD21 peptide

Newman, J.A., Katis, V.L., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.

(2020) Life Sci Alliance 3:

Released	2019-06-19
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Homo sapiens
Macromolecule	Cohesin subunit SA-1 (protein) Double-strand-break repair protein rad21 homolog (protein)
Unique Ligands	SO4

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6RRK \| pdb_00006rrk	Download File View File

Crystal structure of the central region of human cohesin subunit STAG1 in complex with RAD21 peptide

Newman, J.A., katis, V.L., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.

(2020) Life Sci Alliance 3:

Released	2019-06-26
Method	X-RAY DIFFRACTION 3.17 Å
Organisms	Homo sapiens
Macromolecule	Cohesin subunit SA-1 (protein) Double-strand-break repair protein rad21 homolog (protein)

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6VSW \| pdb_00006vsw	Download File View File

Optimization and biological evaluation of thiazole-bis-amide inverse agonists of RORgt

Spurlino, J., Milligan, C.

(2020) Bioorg Med Chem Lett 30: 127205-127205

Released	2020-05-13
Method	X-RAY DIFFRACTION 3.202 Å
Organisms	Homo sapiens
Macromolecule	RAR-related orphan receptor C (protein)
Unique Ligands	RG7

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6YOW \| pdb_00006yow	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.23 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	L3Y

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6YOX \| pdb_00006yox	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-027

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	CA, CL, L3V, MG

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6YOY \| pdb_00006yoy	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-025

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	CL, L3S

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6YP2 \| pdb_00006yp2	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-011

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	CL, P5N

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6YP3 \| pdb_00006yp3	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-028

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	CL, P5Q

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6YP8 \| pdb_00006yp8	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-033

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	CL, P6Z

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6YPL \| pdb_00006ypl	Download File View File

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-037

Wolter, M., Ottmann, C.

(2020) Angew Chem Int Ed Engl 59: 21520-21524

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	14-3-3 protein sigma (protein) p65pS45 (protein)
Unique Ligands	CL, P6H

1 to 25 of 110 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AXT | pdb_00001axt

1ORV | pdb_00001orv

1ORW | pdb_00001orw

2AJ8 | pdb_00002aj8

2AJB | pdb_00002ajb

2AJC | pdb_00002ajc

2AJD | pdb_00002ajd

2EEP | pdb_00002eep

2Z3W | pdb_00002z3w

2Z3Z | pdb_00002z3z

5NXX | pdb_00005nxx

5NXY | pdb_00005nxy

6CVH | pdb_00006cvh

6QB5 | pdb_00006qb5

6R7O | pdb_00006r7o

6RRC | pdb_00006rrc

6RRK | pdb_00006rrk

6VSW | pdb_00006vsw

6YOW | pdb_00006yow

6YOX | pdb_00006yox

6YOY | pdb_00006yoy

6YP2 | pdb_00006yp2

6YP3 | pdb_00006yp3

6YP8 | pdb_00006yp8

6YPL | pdb_00006ypl