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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Revett, T.J."

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Search Summary

This query matches 68 Structures.

Refinements

Structure Determination Methodology

experimental (68)

Scientific Name of Source Organism

	Chlamydomonas reinhardtii (15)
	Thermoproteus tenax (15)
	Homo sapiens (12)
	Saccharolobus solfataricus (9)
	Trypanosoma brucei brucei TREU927 (5)
	Mus musculus (3)
	Saccharomyces cerevisiae (3)
	Trypanosoma cruzi (2)
	Bombyx mori (1)
	Saccharomyces cerevisiae A364A (1)

More...

Taxonomy

	Eukaryota (44)
	Archaea (24)

Experimental Method

	X-RAY DIFFRACTION (66)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (68)
	RNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (10)
	2.0 - 2.5 (28)
	2.5 - 3.0 (11)
	3.0 - 3.5 (14)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (11)
	2005 - 2009 (16)
	2010 - 2014 (18)
	2015 - 2019 (19)
	2020 - 2024 (4)

Enzyme Classification Name

	Hydrolases (18)
	Oxidoreductases (7)
	Lyases (7)
	Transferases (2)
	Isomerases (1)

Symmetry Type

	Asymmetric (37)
	Cyclic (19)
	Dihedral (14)

SCOP Classification

	Alpha and beta proteins (a+b) (13)
	Alpha and beta proteins (a/b) (24)
	All beta proteins (14)
	Artifacts (8)
	Coiled coil proteins (1)

AllSelected

1 to 25 of 68 Structures

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1OJX \| pdb_00001ojx	Download File View File

Crystal structure of an Archaeal fructose 1,6-bisphosphate aldolase

Lorentzen, E., Zwart, P., Stark, A., Hensel, R., Siebers, B., Pohl, E.

(2003) J Biological Chem 278: 47253-47260

Released	2003-09-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermoproteus tenax
Macromolecule	FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I (protein)

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1OK4 \| pdb_00001ok4	Download File View File

Archaeal fructose 1,6-bisphosphate aldolase covalently bound to the substrate dihydroxyacetone phosphate

Lorentzen, E., Zwart, P., Stark, A., Hensel, R., Siebers, B., Pohl, E.

(2003) J Biological Chem 278: 47253-47260

Released	2003-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermoproteus tenax
Macromolecule	FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I (protein)
Unique Ligands	13P

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1OK6 \| pdb_00001ok6	Download File View File

Orthorhombic crystal form of an Archaeal fructose 1,6-bisphosphate aldolase

Lorentzen, E., Zwart, P., Stark, A., Hensel, R., Siebers, B., Pohl, E.

(2003) J Biological Chem 278: 47253-47260

Released	2003-09-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermoproteus tenax
Macromolecule	FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I (protein)
Unique Ligands	GOL

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1UXN \| pdb_00001uxn	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	AMP, NA, NAP

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1UXP \| pdb_00001uxp	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	AMP, NA, NAP

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1UXQ \| pdb_00001uxq	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	G1P, NA, NAP

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1UXR \| pdb_00001uxr	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	F6P, NA, NAP

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1UXT \| pdb_00001uxt	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	G1P, NA, NAD

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1UXU \| pdb_00001uxu	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	AMP, G3H, NA, NAP

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1UXV \| pdb_00001uxv	Download File View File

Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax

Lorentzen, E., Hensel, R., Pohl, E.

(2004) J Mol Biology 341: 815

Released	2004-08-05
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Thermoproteus tenax
Macromolecule	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+) (protein)
Unique Ligands	AMP, NA, NAP

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1W0M \| pdb_00001w0m	Download File View File

Triosephosphate isomerase from Thermoproteus tenax

Walden, H., Taylor, G., Lorentzen, E., Pohl, E., Lilie, H., Schramm, A., Knura, T., Stubbe, K., Tjaden, B., Hensel, R.

(2004) J Mol Biology 342: 861

Released	2004-09-09
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermoproteus tenax
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)
Unique Ligands	PO4

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1W8S \| pdb_00001w8s	Download File View File

The mechanism of the Schiff Base Forming Fructose-1,6-bisphosphate Aldolase: Structural analysis of reaction intermediates

Lorentzen, E., Hensel, R., Siebers, B., Pohl, E.

(2005) Biochemistry 44: 4222-4229

Released	2005-03-23
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thermoproteus tenax
Macromolecule	FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I (protein)
Unique Ligands	FBP

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2BR2 \| pdb_00002br2	Download File View File

RNase PH core of the archaeal exosome

lorentzen, E., Fribourg, S., Conti, E.

(2005) Nat Struct Mol Biol 12: 575

Released	2005-06-06
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharolobus solfataricus
Macromolecule	EXOSOME COMPLEX EXONUCLEASE 1 (protein) EXOSOME COMPLEX EXONUCLEASE 2 (protein)
Unique Ligands	CL

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2C37 \| pdb_00002c37	Download File View File

RNASE PH CORE OF THE ARCHAEAL EXOSOME IN COMPLEX WITH U8 RNA

Lorentzen, E., Conti, E.

(2005) Mol Cell 20: 473

Released	2005-11-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharolobus solfataricus
Macromolecule	PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 (protein) PROBABLE EXOSOME COMPLEX EXONUCLEASE 2 (protein)
Unique Ligands	CL, NA, RP5, U5P

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2C38 \| pdb_00002c38	Download File View File

RNase PH core of the archaeal exosome in complex with A5 RNA

Lorentzen, E., Conti, E.

(2005) Mol Cell 20: 473

Released	2005-11-23
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Saccharolobus solfataricus
Macromolecule	PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 (protein) PROBABLE EXOSOME COMPLEX EXONUCLEASE 2 (protein)
Unique Ligands	AMP, CL

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2C39 \| pdb_00002c39	Download File View File

RNase PH core of the archaeal exosome in complex with ADP

Lorentzen, E., Conti, E.

(2005) Mol Cell 20: 473

Released	2005-11-23
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Saccharolobus solfataricus
Macromolecule	PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 (protein) PROBABLE EXOSOME COMPLEX EXONUCLEASE 2 (protein)
Unique Ligands	ADP

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2J0Q \| pdb_00002j0q	Download File View File

The crystal structure of the Exon Junction Complex at 3.2 A resolution

Bono, F., Ebert, J., Lorentzen, E., Conti, E.

(2006) Cell 126: 713

Released	2006-08-30
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	ATP-DEPENDENT RNA HELICASE DDX48 (protein) PROTEIN CASC3 (protein) PROTEIN MAGO NASHI HOMOLOG (protein) RNA-BINDING PROTEIN 8A (protein) 5'-R(UPUPUPUPUPUPUPUPUPUPUPUPUPUP*U)-3' (nucleic acid)
Unique Ligands	ANP, MG

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2J0S \| pdb_00002j0s	Download File View File

The crystal structure of the Exon Junction Complex at 2.2 A resolution

Bono, F., Ebert, J., Lorentzen, E., Conti, E.

(2006) Cell 126: 713

Released	2006-09-06
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Homo sapiens
Macromolecule	ATP-DEPENDENT RNA HELICASE DDX48 (protein) PROTEIN CASC3 (protein) PROTEIN MAGO NASHI HOMOLOG (protein) RNA-BINDING PROTEIN 8A (protein) 5'-R(UPUPUPUPUPUPUPUPUPUP UPUPUPUP*U)-3' (nucleic acid)
Unique Ligands	ANP, MG

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2J0U \| pdb_00002j0u	Download File View File

The crystal structure of eIF4AIII-Barentsz complex at 3.0 A resolution

Bono, F., Ebert, J., Lorentzen, E., Conti, E.

(2006) Cell 126: 713

Released	2006-09-06
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	ATP-DEPENDENT RNA HELICASE DDX48 (protein) PROTEIN CASC3 (protein)

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2JA9 \| pdb_00002ja9	Download File View File

Structure of the N-terminal deletion of yeast exosome component Rrp40

Oddone, A., Lorentzen, E., Basquin, J., Gasch, A., Rybin, V., Conti, E., Sattler, M.

(2007) EMBO Rep 8: 63

Released	2006-12-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	EXOSOME COMPLEX EXONUCLEASE RRP40 (protein)

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2JE6 \| pdb_00002je6	Download File View File

Structure of a 9-subunit archaeal exosome

Lorentzen, E., Conti, E.

(2007) EMBO Rep 8: 470

Released	2007-01-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Saccharolobus solfataricus
Macromolecule	EXOSOME COMPLEX EXONUCLEASE 1 (protein) EXOSOME COMPLEX EXONUCLEASE 2 (protein) EXOSOME COMPLEX RNA-BINDING PROTEIN 1 (protein)
Unique Ligands	1PE, CL, PEG

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2JEA \| pdb_00002jea	Download File View File

Structure of a 9-subunit archaeal exosome bound to RNA

Lorentzen, E., Conti, E.

(2007) EMBO Rep 8: 470

Released	2007-04-03
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Saccharolobus solfataricus
Macromolecule	EXOSOME COMPLEX EXONUCLEASE 1 (protein) EXOSOME COMPLEX EXONUCLEASE 2 (protein) EXOSOME COMPLEX RNA-BINDING PROTEIN 1 (protein) RNA (nucleic acid)
Unique Ligands	1PE

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2JEB \| pdb_00002jeb	Download File View File

Structure of a 9-subunit archaeal exosome bound to Mn ions

Lorentzen, E., Conti, E.

(2007) EMBO Rep 8: 470

Released	2007-04-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharolobus solfataricus
Macromolecule	EXOSOME COMPLEX EXONUCLEASE 1 (protein) EXOSOME COMPLEX EXONUCLEASE 2 (protein) EXOSOME COMPLEX RNA-BINDING PROTEIN 1 (protein)
Unique Ligands	1PE, CL, MN

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2R91 \| pdb_00002r91	Download File View File

Crystal Structure of KD(P)GA from T.tenax

Pauluhn, A., Pohl, E., Lorentzen, E., Siebers, B., Ahmed, H., Buchinger, S., Schomburg, D.

(2008) Proteins 72: 35-43

Released	2008-03-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermoproteus tenax
Macromolecule	2-Keto-3-deoxy-(6-phospho-)gluconate aldolase (protein)
Unique Ligands	SO4

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2R94 \| pdb_00002r94	Download File View File

Crystal Structure of KD(P)GA from T.tenax

Pauluhn, A., Pohl, E.

(2008) Proteins 72: 35-43

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermoproteus tenax
Macromolecule	2-Keto-3-deoxy-(6-phospho-)gluconate aldolase (protein)
Unique Ligands	PYR

1 to 25 of 68 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1OJX | pdb_00001ojx

1OK4 | pdb_00001ok4

1OK6 | pdb_00001ok6

1UXN | pdb_00001uxn

1UXP | pdb_00001uxp

1UXQ | pdb_00001uxq

1UXR | pdb_00001uxr

1UXT | pdb_00001uxt

1UXU | pdb_00001uxu

1UXV | pdb_00001uxv

1W0M | pdb_00001w0m

1W8S | pdb_00001w8s

2BR2 | pdb_00002br2

2C37 | pdb_00002c37

2C38 | pdb_00002c38

2C39 | pdb_00002c39

2J0Q | pdb_00002j0q

2J0S | pdb_00002j0s

2J0U | pdb_00002j0u

2JA9 | pdb_00002ja9

2JE6 | pdb_00002je6

2JEA | pdb_00002jea

2JEB | pdb_00002jeb

2R91 | pdb_00002r91

2R94 | pdb_00002r94