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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Rossmann, M.G."

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Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

	Escherichia coli K-12 (12)
	Homo sapiens (12)
	Plasmodium falciparum (5)
	Saccharomyces cerevisiae (3)
	Actinobacillus pleuropneumoniae (1)
	Anas platyrhynchos (1)
	Bacillus subtilis (1)
	Drosophila melanogaster (1)
	Human immunodeficiency virus type 1 (BRU ISOLATE) (1)
	Macaca mulatta (1)

More...

Taxonomy

	Eukaryota (23)
	Bacteria (16)
	Archaea (1)
	Riboviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (35)
	ELECTRON MICROSCOPY (3)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (40)
	DNA (10)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (13)
	2.0 - 2.5 (13)
	2.5 - 3.0 (7)
	3.0 - 3.5 (3)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (10)
	2005 - 2009 (12)
	2010 - 2014 (4)
	2015 - 2019 (5)
	2020 - 2024 (8)

Enzyme Classification Name

	Oxidoreductases (12)
	Hydrolases (9)
	Transferases (3)
	Lyases (2)

Membrane Protein Annotation

	PDBTM (3)
	MemProtMD (2)
	mpstruc (2)
	OPM (1)

Symmetry Type

	Asymmetric (28)
	Cyclic (13)
	Dihedral (2)
	Tetrahedral (1)

SCOP Classification

	All beta proteins (18)
	Alpha and beta proteins (a/b) (4)
	All alpha proteins (1)
	Alpha and beta proteins (a+b) (3)
	Artifacts (3)

AllSelected

1 to 25 of 40 Structures

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1K7W	Download File View File

Crystal Structure of S283A Duck Delta 2 Crystallin Mutant

Sampaleanu, L.M., Yu, B., Howell, P.L.

(2002) J Biol Chem 277: 4166-4175

Released	2002-03-06
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Anas platyrhynchos
Macromolecule	delta 2 crystallin (protein)
Unique Ligands	AS1

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1LEE	Download File View File

CRYSTAL STRUCTURE OF PLASMEPSIN FROM P. FALCIPARUM IN COMPLEX WITH INHIBITOR RS367

Asojo, O.A., Afonina, E., Gulnik, S.V., Yu, B., Erickson, J.W., Randad, R., Mehadjed, D., Silva, A.M.

(2002) Acta Crystallogr D Biol Crystallogr 58: 2001-2008

Released	2002-10-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Plasmodium falciparum
Macromolecule	Plasmepsin 2 (protein)
Unique Ligands	R36

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1LF2	Download File View File

CRYSTAL STRUCTURE OF PLASMEPSIN II FROM P FALCIPARUM IN COMPLEX WITH INHIBITOR RS370

Asojo, O.A., Afonina, E., Gulnik, S.V., Yu, B., Erickson, J.W., Randad, R., Mehadjed, D., Silva, A.M.

(2002) Acta Crystallogr D Biol Crystallogr 58: 2001-2008

Released	2002-10-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Plasmodium falciparum
Macromolecule	Plasmepsin 2 (protein)
Unique Ligands	R37

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1LF3	Download File View File

CRYSTAL STRUCTURE OF PLASMEPSIN II FROM P FALCIPARUM IN COMPLEX WITH INHIBITOR EH58

Asojo, O.A., Gulnik, S.V., Afonina, E., Yu, B., Ellman, J.A., Haque, T.S., Silva, A.M.

(2003) J Mol Biol 327: 173-181

Released	2002-10-10
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Plasmodium falciparum
Macromolecule	plasmepsin 2 (protein)
Unique Ligands	EH5

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1LF4	Download File View File

STRUCTURE OF PLASMEPSIN II

Asojo, O.A., Gulnik, S.V., Afonina, E., Yu, B., Ellman, J.A., Haque, T.S., Silva, A.M.

(2003) J Mol Biol 327: 173-181

Released	2002-10-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Plasmodium falciparum
Macromolecule	Plasmepsin 2 (protein)

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1LS5	Download File View File

Crystal structure of plasmepsin IV from P. falciparum in complex with pepstatin A

Asojo, O.A., Gulnik, S.V., Afonina, E., Yu, B., Ellman, J.A., Haque, T.S., Silva, A.M.

(2003) J Mol Biol 327: 173-181

Released	2002-06-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Plasmodium falciparum Streptomyces argenteolus subsp. toyonakensis
Macromolecule	Pepstatin (protein) plasmepsin IV (protein)

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1S4N	Download File View File

Crystal structure of yeast alpha1,2-mannosyltransferase Kre2p/Mnt1p

Lobsanov, Y.D., Romero, P.A., Sleno, B., Yu, B., Yip, P., Herscovics, A., Howell, P.L.

(2004) J Biol Chem 279: 17921-17931

Released	2004-05-04
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Glycolipid 2-alpha-mannosyltransferase (protein)
Unique Ligands	CL, GOL
Unique branched monosaccharides	BMA, MAN, NAG, NDG

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1S4O	Download File View File

Crystal structure of yeast alpha1,2-mannosyltransferase Kre2p/Mnt1p: binary complex with GDP/Mn

Lobsanov, Y.D., Romero, P.A., Sleno, B., Yu, B., Yip, P., Herscovics, A., Howell, P.L.

(2004) J Biol Chem 279: 17921-17931

Released	2004-05-04
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Glycolipid 2-alpha-mannosyltransferase (protein)
Unique Ligands	CL, EPE, GDP, MN
Unique branched monosaccharides	BMA, MAN, NAG, NDG

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1S4P	Download File View File

Crystal structure of yeast alpha1,2-mannosyltransferase Kre2p/Mnt1p: ternary complex with GDP/Mn and methyl-alpha-mannoside acceptor

Lobsanov, Y.D., Romero, P.A., Sleno, B., Yu, B., Yip, P., Herscovics, A., Howell, P.L.

(2004) J Biol Chem 279: 17921-17931

Released	2004-05-04
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Glycolipid 2-alpha-mannosyltransferase (protein)
Unique Ligands	CL, EPE, GDP, MMA, MN
Unique branched monosaccharides	BMA, MAN, NAG

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1UQR	Download File View File

Type II 3-dehydroquinate dehydratase (DHQase) from Actinobacillus pleuropneumoniae

Maes, D., Gonzalez-Ramirez, L.A., Lopez-Jaramillo, J., Yu, B., De Bondt, H., Zegers, I., Afonina, E., Garcia-Ruiz, J.M., Gulnik, S.

(2004) Acta Crystallogr D Biol Crystallogr 60: 463

Released	2003-10-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Actinobacillus pleuropneumoniae
Macromolecule	3-DEHYDROQUINATE DEHYDRATASE (protein)
Unique Ligands	SO4, TRS

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2FD8	Download File View File

Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein) 5'-D(PTP(MA7)P*T)-3' (nucleic acid)
Unique Ligands	AKG, FE2

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2FDF	Download File View File

Crystal Structure of AlkB in complex with Co(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein) 5'-D(PTP(MA7)P*T)-3' (nucleic acid)
Unique Ligands	AKG, CO

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2FDG	Download File View File

Crystal Structure of AlkB in complex with Fe(II), succinate, and methylated trinucleotide T-meA-T

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein) 5'-D(PTP(MA7)P*T)-3' (nucleic acid)
Unique Ligands	FE2, SIN

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2FDH	Download File View File

Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein) 5'-D(PTP(MA7)P*T)-3' (nucleic acid)
Unique Ligands	AKG, MN

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2FDI	Download File View File

Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T (air 3 hours)

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein) 5'-D(PTP(MA7)P*T)-3' (nucleic acid)
Unique Ligands	AKG, FE2, SIN

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2FDJ	Download File View File

Crystal Structure of AlkB in complex with Fe(II) and succinate

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein)
Unique Ligands	FE2, SIN

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2FDK	Download File View File

Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T (air 9 days)

Yu, B., Benach, J., Edstrom, W.C., Gibney, B.R., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2006) Nature 439: 879-884

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli K-12
Macromolecule	Alkylated DNA repair protein alkB (protein) 5'-D(PTP(MA7)P*T)-3' (nucleic acid)
Unique Ligands	AKG, FE2, SIN

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2K4K	Download File View File

Solution structure of GSP13 from Bacillus subtilis

Yu, W., Yu, B., Hu, J., Jin, C., Xia, B.

(2009) J Biomol NMR 43: 255-259

Released	2009-05-12
Method	SOLUTION NMR
Organisms	Bacillus subtilis
Macromolecule	General stress protein 13 (protein)

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2LP6	Download File View File

Refined Solution NMR Structure of the 50S ribosomal protein L35Ae from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target (NESG) PfR48

Snyder, D.A., Aramini, J.M., Yu, B., Huang, Y.J., Xiao, R., Cort, J.R., Shastry, R., Ma, L., Liu, J., Rost, B., Acton, T.B., Kennedy, M.A., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

(2012) Proteins 80: 1901-1906

Released	2012-02-15
Method	SOLUTION NMR
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	50S ribosomal protein L35Ae (protein)

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3I2O	Download File View File

Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meA-T

Yu, B., Hunt, J.F.

(2009) Proc Natl Acad Sci U S A 106: 14315-14320

Released	2009-08-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase alkB (protein) DNA (5'-D(PTP(MA7)P*T)-3') (nucleic acid)
Unique Ligands	AKG, FE2

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3I3M	Download File View File

Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate and methylated trinucleotide T-meC-T

Yu, B., Hunt, J.F.

(2009) Proc Natl Acad Sci U S A 106: 14315-14320

Released	2009-08-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase alkB (protein) DNA (5'-D(PTP(ME6)P*T)-3') (nucleic acid)
Unique Ligands	AKG, MN

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3I3Q	Download File View File

Crystal Structure of AlkB in complex with Mn(II) and 2-oxoglutarate

Yu, B., Hunt, J.F.

(2009) Proc Natl Acad Sci U S A 106: 14315-14320

Released	2009-08-25
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase alkB (protein)
Unique Ligands	AKG, MN

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3I49	Download File View File

Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meC-T

Yu, B., Hunt, J.F.

(2009) Proc Natl Acad Sci U S A 106: 14315-14320

Released	2009-08-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase alkB (protein) DNA (5'-D(PTP(ME6)P*T)-3') (nucleic acid)
Unique Ligands	AKG, FE2

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3KY9	Download File View File

Autoinhibited Vav1

Tomchick, D.R., Rosen, M.K., Machius, M., Yu, B.

(2010) Cell 140: 246-256

Released	2010-02-23
Method	X-RAY DIFFRACTION 2.731 Å
Organisms	Homo sapiens
Macromolecule	Proto-oncogene vav (protein)
Unique Ligands	ZN

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3SEO	Download File View File

Crystal structure of VopL C terminal domain

Yu, B., Rosen, M.K., Tomchick, D.R.

(2011) Nat Struct Mol Biol 18: 1068-1074

Released	2011-08-31
Method	X-RAY DIFFRACTION 2.305 Å
Organisms	Vibrio parahaemolyticus
Macromolecule	VopL C terminal domain protein (protein)
Unique Ligands	CL